Assessing quality and completeness of human transcriptional regulatory pathways on a genome-wide scale

被引:0
|
作者
Evgeny Shmelkov
Zuojian Tang
Iannis Aifantis
Alexander Statnikov
机构
[1] New York University School of Medicine,Department of Pharmacology
[2] New York University School of Medicine,Center for Health Informatics and Bioinformatics
[3] New York University School of Medicine,Howard Hughes Medical Institute and Department of Pathology
[4] New York University School of Medicine,Department of Medicine
来源
关键词
Ingenuity Pathway Analysis; Pathway Database; HUGO Gene Nomenclature Committee; Direct Transcriptional Target; Pathway Studio;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Assessing quality and completeness of human transcriptional regulatory pathways on a genome-wide scale
    Shmelkov, Evgeny
    Tang, Zuojian
    Aifantis, Iannis
    Statnikov, Alexander
    BIOLOGY DIRECT, 2011, 6
  • [2] The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm
    Cheng, Dong
    Cheng, Tingcai
    Yang, Xi
    Zhang, Quan
    Fu, Jianfeng
    Feng, Tieshan
    Gong, Jiao
    Xia, Qingyou
    EPIGENETICS & CHROMATIN, 2018, 11
  • [3] The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm
    Dong Cheng
    Tingcai Cheng
    Xi Yang
    Quan Zhang
    Jianfeng Fu
    Tieshan Feng
    Jiao Gong
    Qingyou Xia
    Epigenetics & Chromatin, 11
  • [4] Genome-Wide Measurement of Bacterial Transcriptional Regulatory States
    Freddolino, Peter
    Tavazoie, Saeed
    BIOPHYSICAL JOURNAL, 2013, 104 (02) : 328A - 328A
  • [5] Genome-wide map of regulatory interactions in the human genome
    Heidari, Nastaran
    Phanstiel, Douglas H.
    He, Chao
    Grubert, Fabian
    Jahanbani, Fereshteh
    Kasowski, Maya
    Zhang, Michael Q.
    Snyder, Michael P.
    GENOME RESEARCH, 2014, 24 (12) : 1905 - 1917
  • [6] High-resolution genome-wide functional dissection of transcriptional regulatory regions and nucleotides in human
    Xinchen Wang
    Liang He
    Sarah M. Goggin
    Alham Saadat
    Li Wang
    Nasa Sinnott-Armstrong
    Melina Claussnitzer
    Manolis Kellis
    Nature Communications, 9
  • [7] High-resolution genome-wide functional dissection of transcriptional regulatory regions and nucleotides in human
    Wang, Xinchen
    He, Liang
    Goggin, Sarah M.
    Saadat, Alham
    Wang, Li
    Sinnott-Armstrong, Nasa
    Claussnitzer, Melina
    Kellis, Manolis
    NATURE COMMUNICATIONS, 2018, 9
  • [8] A genome scale transcriptional regulatory model of the human placenta
    Paquette, Alison
    Ahuna, Kylia
    Hwang, Yeon Mi
    Pearl, Jocelynn
    Liao, Hanna
    Shannon, Paul
    Kadam, Leena
    Lapehn, Samantha
    Bucher, Matthew
    Roper, Ryan
    Funk, Cory
    MacDonald, James
    Bammler, Theo
    Baloni, Priyanka
    Brockway, Heather
    Mason, W. Alex
    Bush, Nicole
    Lewinn, Kaja Z.
    Karr, Catherine J.
    Stamatoyannopoulos, John
    Muglia, Louis J.
    Jones, Helen
    Sadovsky, Yoel
    Myatt, Leslie
    Sathyanarayana, Sheela
    Price, Nathan D.
    SCIENCE ADVANCES, 2024, 10 (26): : eadf3411
  • [9] GENOME-WIDE MICRORNA EXPRESSION PROFILE AND REGULATORY SIGNALING PATHWAYS IN GANGLIOGLIOMA
    Majumdar, A.
    Kakkar, A.
    Kumar, A.
    Pathak, P.
    Sharma, M. C.
    Suri, V
    Chandra, S. P.
    Sarkar, C.
    EPILEPSIA, 2016, 57 : 58 - 59
  • [10] Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression
    Blanchette, M
    Bataille, AR
    Chen, XY
    Poitras, C
    Laganière, J
    Lefèbvre, C
    Deblois, G
    Giguère, V
    Ferretti, V
    Bergeron, D
    Coulombe, B
    Robert, FO
    GENOME RESEARCH, 2006, 16 (05) : 656 - 668