Genome-wide characterization of the basic leucine zipper transcription factors in Camellia sinensis

被引:0
|
作者
Yan Hou
Ailin Wu
Yaxian He
Fangdong Li
Chaoling Wei
机构
[1] Anhui Agricultural University,State Key Laboratory of Tea Plant Biology and Utilization
来源
Tree Genetics & Genomes | 2018年 / 14卷
关键词
bZIP transcription factors; Genome-wide; Drought stress; Cold stress; feeding;
D O I
暂无
中图分类号
学科分类号
摘要
The basic leucine zipper (bZIP) transcription factor family contains a large number of genes and has been found in many plant species. Previous studies have reported that bZIP family genes play important roles in the regulation of plant development and biotic/abiotic stress responses. However, a comprehensive investigation of this transcription factor family in tea plant (Camellia sinensis) has been lacking. In this study, a total of 61 bZIP genes were identified from the tea plant whole genome. The phylogenetic analysis classified these bZIP genes into 11 groups. The gene structures and composition patterns of the conserved motifs of bZIP genes were also characterized, which was consistent with the phylogenetic result. The gene expression analysis revealed that multiple bZIPs could be involved in response to drought, cold, or tea geometrid (Ectropis oblique) feeding. Our expression profile also indicated that many identified bZIPs were possibly involved in different developmental stages in tea plant. This study has provided an extensive overview of the tea plant bZIP transcription factor family and their possible roles in stress-responses.
引用
收藏
相关论文
共 50 条
  • [1] Genome-wide characterization of the basic leucine zipper transcription factors in Camellia sinensis
    Hou, Yan
    Wu, Ailin
    He, Yaxian
    Li, Fangdong
    Wei, Chaoling
    TREE GENETICS & GENOMES, 2018, 14 (02)
  • [2] Genome-Wide Analysis, Characterization, and Expression Profile of the Basic Leucine Zipper Transcription Factor Family in Pineapple
    Liu, Yanhui
    Chai, Mengnan
    Zhang, Man
    He, Qing
    Su, Zhenxia
    Priyadarshani, S. V. G. N.
    Liu, Liping
    Dong, Guanxi
    Qin, Yuan
    INTERNATIONAL JOURNAL OF GENOMICS, 2020, 2020
  • [3] Genome-wide Expansion and Expression Divergence of the Basic Leucine Zipper Transcription Factors in Higher Plants with an Emphasis on Sorghum
    Jeevanandam Vanitha
    Srinivasan Ramachandran
    Journal of Integrative Plant Biology, 2011, 53 (03) : 212 - 231
  • [4] Genome-wide Expansion and Expression Divergence of the Basic Leucine Zipper Transcription Factors in Higher Plants with an Emphasis on Sorghum
    Wang, Jizhou
    Zhou, Junxia
    Zhang, Baolan
    Vanitha, Jeevanandam
    Ramachandran, Srinivasan
    Jiang, Shu-Ye
    JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2011, 53 (03) : 212 - 231
  • [5] Basic Leucine Zipper Family in Barley: Genome-Wide Characterization of Members and Expression Analysis
    Ehsan Pourabed
    Farzan Ghane Golmohamadi
    Peyman Soleymani Monfared
    Seyed Morteza Razavi
    Zahra-Sadat Shobbar
    Molecular Biotechnology, 2015, 57 : 12 - 26
  • [6] Basic Leucine Zipper Family in Barley: Genome-Wide Characterization of Members and Expression Analysis
    Pourabed, Ehsan
    Golmohamadi, Farzan Ghane
    Monfared, Peyman Soleymani
    Razavi, Seyed Morteza
    Shobbar, Zahra-Sadat
    MOLECULAR BIOTECHNOLOGY, 2015, 57 (01) : 12 - 26
  • [7] Genome-wide characterization of NAC transcription factors in Camellia sinensis and the involvement of CsNAC28 in drought tolerance
    Zhang, Xueying
    Li, Linying
    Lang, Zhuoliang
    Li, Da
    He, Yuqing
    Zhao, Yao
    Tao, Han
    Wei, Jiqian
    Li, Qingsheng
    Hong, Gaojie
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [8] Genome-wide identification and analysis of the basic leucine zipper (bZIP) transcription factor gene family in Ustilaginoidea virens
    Yin, Weixiao
    Cui, Peng
    Wei, Wei
    Lin, Yang
    Luo, Chaoxi
    GENOME, 2017, 60 (12) : 1059 - 1067
  • [9] Genome-wide analysis of the basic leucine zipper (bZIP) transcription factor gene family in six legume genomes
    Zhihui Wang
    Ke Cheng
    Liyun Wan
    Liying Yan
    Huifang Jiang
    Shengyi Liu
    Yong Lei
    Boshou Liao
    BMC Genomics, 16
  • [10] Genome-wide analysis of the basic leucine zipper (bZIP) transcription factor gene family in six legume genomes
    Wang, Zhihui
    Cheng, Ke
    Wan, Liyun
    Yan, Liying
    Jiang, Huifang
    Liu, Shengyi
    Lei, Yong
    Liao, Boshou
    BMC GENOMICS, 2015, 16