Isolation and molecular characterization of a cryptic plasmid from Bifidobacterium longum

被引:0
作者
Young-Seo Park
Ki-Hwan Kim
Ju Hui Park
In-Kyung Oh
Sung-Sik Yoon
机构
[1] Kyungwon University,Department of Food Science and Biotechnology
[2] Kyungwon University,Type Culture Bank of Korea
[3] Yonsei University,Department of Biological Resources and Technology
[4] Yonsei University,Institute of Functional Biomaterials and Biotechnology
来源
Biotechnology Letters | 2008年 / 30卷
关键词
Mobilization; Protein plasmid isolation; Replication protein;
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学科分类号
摘要
An isolate from the fecal samples of children was identified as Bifidobacterium longum. A plasmid isolated from it pBIFA24 was 4,892 bp with three open reading frames, ORFI, ORFII, and ORFIII. ORFI encoded a replication protein involved in a rolling-circle replication mechanism, and three sets of tandem repeat sequences featuring iteron structure were identified. Secondary structure prediction analysis of ORFII suggested it was a transmembrane protein. ORFIII showed high amino acid sequence identity with some mobilization proteins and contained an oriT sequence.
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页码:145 / 151
页数:6
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共 73 条
[1]  
Anderson DG(1983)Simple and rapid method for isolating large plasmid DNA from lactic Streptococci Appl Environ Microbiol 45 549-552
[2]  
Mckay LL(1996)A convenient and reproducible method to genetically transform bacteria of the genus Microbiology 142 109-114
[3]  
Argnani A(1993)Analysis of the genome of five FEMS Microbiol Lett 110 11-20
[4]  
Leer RJ(2004) strains: plasmid content, pulsed-field gel electrophoresis genome size estimation and Mutat Res Fund Mol Mech Mutagen 551 233-243
[5]  
van Luijk N(2001) loci number EMBO J 12 3262-3271
[6]  
Pouwels PH(2004)Antigenotoxicity of probiotics and prebiotics on faecal water-induced DNA damage in human colon adenocarcinoma cells Plasmid 51 87-100
[7]  
Bourget N(1998)A broad host range replicon with different requirements for replication initiation in three bacterial species Microbiol Mol Biol Rev 62 434-464
[8]  
Simonet JM(1992)Molecular characterization of three plasmids from J Biol Chem 267 24538-24543
[9]  
Decaris B(1992)Replication and control of circular bacterial plasmids Proc Natl Acad Sci USA 89 3083-3087
[10]  
Burns AJ(1998)Six amino acids determine the sequence-specific DNA binding and replication specificity of the initiator proteins of the pT181 family Mol Microbiol 29 1029-1038