Simulation of the Effect of Reorientation of Hydrogen Bonds in Proteins on Long-Range Electron Transfer

被引:0
作者
Vladimir P. Zhdanov
机构
[1] Chalmers University of Technology,Department of Applied Physics
[2] Russian Academy of Sciences,Boreskov Institute of Catalysis
来源
Journal of Biological Physics | 2004年 / 30卷
关键词
electron tunneling; β sheets; lattice protein models; Monte Carlo simulations;
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摘要
We present Monte Carlo simulations illustrating the influence of reorientation of hydrogen bonds in proteins on long-range interprotein electron transfer. The lattice protein model employed mimics the electron donor (or acceptor) interacting with an antiparallel β sheet. In addition, we take into account harmonic vibrations of the medium and also the dependence of the coupling matrix element on orientation of hydrogen bonds near the donor and/or acceptor. The results obtained show that the interaction between the tunneling electron and amino-acid residues, which are responsible for the formation of hydrogen bonds, may result in broadening the parabolic dependence of the electron-transfer rate constant on the reaction exothermicity and also in deviations from this dependence especially in the cases when the β sheet is linked with the electron donor.
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页码:365 / 375
页数:10
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