Identification of Significant RNA-Binding Proteins in the Process of CD44 Splicing Using the Boosted Beta Regression Algorithm

[1] Pan Q.(2008)Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing Nat. Genet 40 1413-1415

[2] Shai O.(2008)Splicing regulation: From a parts list of regulatory elements to an integrated splicing code RNA 14 802-813

[3] Lee L.J.(2006)General and specific functions of exonic splicing silencers in splicing control Mol. Cell 23 61-70

[4] Frey B.J.(2011)Bayesian prediction of tissue-regulated splicing using RNA sequence and cellular context Bioinformatics 27 2554-2562

[5] Blen-cowe B.J.(2009)Decrypting the genome’s alternative messages Curr. Opin. Cell Biol 21 377-386

[6] Wang Z.(2010)Deciphering the splicing code Nature 465 53-59

[7] Burge C.B.(2014)RNA motifs: prediction of multivalent RNA motifs that control alternative splicing Genome Biol. 15 R20-i129

[8] Wang Z.(2014)Deep learning of the tissue-regulated splicing code Bioinformatics 3 i121-140

[9] Xiao X.(2020)CD44 as a tumor biomarker and therapeutic target Exp. Hematol. Oncol 9 36-D131

[10] Van Nostrand E.(2010)edgeR: a Bioconductor package for differential expression analysis of digital gene expression data Bioinformatics 26 139-54

[1] Pan Q.(2008)Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing Nat. Genet 40 1413-1415

[2] Shai O.(2008)Splicing regulation: From a parts list of regulatory elements to an integrated splicing code RNA 14 802-813

[3] Lee L.J.(2006)General and specific functions of exonic splicing silencers in splicing control Mol. Cell 23 61-70

[4] Frey B.J.(2011)Bayesian prediction of tissue-regulated splicing using RNA sequence and cellular context Bioinformatics 27 2554-2562

[5] Blen-cowe B.J.(2009)Decrypting the genome’s alternative messages Curr. Opin. Cell Biol 21 377-386

[6] Wang Z.(2010)Deciphering the splicing code Nature 465 53-59

[7] Burge C.B.(2014)RNA motifs: prediction of multivalent RNA motifs that control alternative splicing Genome Biol. 15 R20-i129

[8] Wang Z.(2014)Deep learning of the tissue-regulated splicing code Bioinformatics 3 i121-140

[9] Xiao X.(2020)CD44 as a tumor biomarker and therapeutic target Exp. Hematol. Oncol 9 36-D131

[10] Van Nostrand E.(2010)edgeR: a Bioconductor package for differential expression analysis of digital gene expression data Bioinformatics 26 139-54