Multiple-trait analyses improved the accuracy of genomic prediction and the power of genome-wide association of productivity and climate change-adaptive traits in lodgepole pine

被引:0
作者
Eduardo P. Cappa
Charles Chen
Jennifer G. Klutsch
Jaime Sebastian-Azcona
Blaise Ratcliffe
Xiaojing Wei
Letitia Da Ros
Aziz Ullah
Yang Liu
Andy Benowicz
Shane Sadoway
Shawn D. Mansfield
Nadir Erbilgin
Barb R. Thomas
Yousry A. El-Kassaby
机构
[1] Instituto Nacional de Tecnología Agropecuaria (INTA),Department of Biochemistry and Molecular Biology
[2] Instituto de Recursos Biológicos,Department of Renewable Resources
[3] Centro de Investigación en Recursos Naturales,Present address: Department of Forestry
[4] Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET),Department of Forest and Conservation Sciences, Faculty of Forestry
[5] Oklahoma State University,Department of Wood Science, Faculty of Forestry
[6] University of Alberta,undefined
[7] New Mexico Highlands University,undefined
[8] Present address: Irrigation and Crop Ecophysiology Group,undefined
[9] Instituto de Recursos Naturales y Agrobiología de Sevilla,undefined
[10] Avenida Reina Mercedes,undefined
[11] University of British Columbia,undefined
[12] University of British Columbia,undefined
[13] Forest Stewardship and Trade Branch,undefined
[14] Alberta Agriculture and Forestry,undefined
[15] Blue Ridge Lumber Inc.,undefined
[16] West Fraser Mills Ltd,undefined
来源
BMC Genomics | / 23卷
关键词
Quantitative genetic parameters; Genomic prediction; Genome wide association analyses; Single- and multiple-trait mixed models; Lodgepole pine;
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[31]  
Perron M(2019)Genome-wide association genetics of an adaptive trait in lodgepole pine Bioinformatics. 35 2251-768
[32]  
Isabel N(2019)Integrate multiple traits to detect novel trait-gene association using GWAS summary data with an adaptive test approach New Phytol 223 293-1776
[33]  
Beaulieu J(2010)Multitrait genome-wide association analysis of Populus trichocarpa identifies key polymorphisms controlling morphological and physiological traits J Dairy Sci 93 3818-1546
[34]  
Calleja-Rodriguez A(2021)Multivariate analysis of a genome-wide association study in dairy cattle BMC Genomics 22 57-484
[35]  
Pan J(2015)Multi-trait GWAS using imputed high-density genotypes from whole-genome sequencing identifies genes associated with body traits in Nile tilapia Genet Epidemiol 39 77-364
[36]  
Funda T(2010)Fine-mapping additive and dominant SNP effects using group-LASSO and fractional resample model averaging Genetics. 185 1021-12
[37]  
Chen Z(2015)The impact of genetic architecture on genome-wide evaluation methods Plant Sci 242 108-1278
[38]  
Baison J(2015)Genomic selection in maritime pine Heredity (Edinb). 115 547-3077
[39]  
Isik F(2011)A comparison of genomic selection models across time in interior spruce (Picea engelmannii × glauca) using unordered SNP imputation methods Genet Sel Evol 43 26-1544
[40]  
Beaulieu J(2017)Accuracy of multi-trait genomic selection using different methods Genomes, Genet 7 41-686