Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes

被引：0

作者：

Anna Vlasova

Salvador Capella-Gutiérrez

Martha Rendón-Anaya

Miguel Hernández-Oñate

André E. Minoche

Ionas Erb

Francisco Câmara

Pablo Prieto-Barja

André Corvelo

Walter Sanseverino

Gastón Westergaard

Juliane C. Dohm

Georgios J. Pappas

Soledad Saburido-Alvarez

Darek Kedra

Irene Gonzalez

Luca Cozzuto

Jessica Gómez-Garrido

María A. Aguilar-Morón

Nuria Andreu

O. Mario Aguilar

Jordi Garcia-Mas

Maik Zehnsdorf

Martín P. Vázquez

Alfonso Delgado-Salinas

Luis Delaye

Ernesto Lowy

Alejandro Mentaberry

Rosana P. Vianello-Brondani

José Luís García

Tyler Alioto

Federico Sánchez

Heinz Himmelbauer

Marta Santalla

Cedric Notredame

Toni Gabaldón

Alfredo Herrera-Estrella

Roderic Guigó

机构：

[1] Centre for Genomic Regulation (CRG),Department of Cellular Biology

[2] Barcelona Institute of Science and Technology (BIST),Departamento de Botánica, Instituto de Biología

[3] Universitat Pompeu Fabra (UPF),Departamento de Ingeniería Genética

[4] Yeast and Basidiomycete Research Group,Depto. de Biología Molecular de Plantas, Instituto Biotecnología

[5] CBS Fungal Biodiversity Centre,undefined

[6] Laboratorio Nacional de Genómica para la Biodiversidad,undefined

[7] Cinvestav-Irapuato,undefined

[8] Garvan Institute of Medical Research,undefined

[9] New York Genome Center,undefined

[10] IRTA,undefined

[11] Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB,undefined

[12] Instituto de Agrobiotecnología Rosario (INDEAR),undefined

[13] Department of Biotechnology,undefined

[14] University of Natural Resources and Life Sciences (BOKU),undefined

[15] University of Brasilia,undefined

[16] Biological Science Institute,undefined

[17] Genomics Unit,undefined

[18] Centre for Genomic Regulation (CRG),undefined

[19] Barcelona Institute of Science and Technology (BIST),undefined

[20] CNAG-CRG,undefined

[21] Centre for Genomic Regulation (CRG),undefined

[22] Barcelona Institute of Science and Technology (BIST),undefined

[23] Instituto de Biotecnología y Biología Molecular (IBBM),undefined

[24] UNLP-CONICET,undefined

[25] Universidad Nacional Autónoma de México,undefined

[26] Unidad Irapuato,undefined

[27] Cinvestav,undefined

[28] European Molecular Biology Laboratory,undefined

[29] European Bioinformatics Institute,undefined

[30] Wellcome Trust Genome Campus,undefined

[31] Facultad de Ciencias Exactas y Naturales,undefined

[32] Universidad de Buenos Aires (UBA),undefined

[33] C1428EGA,undefined

[34] EMBRAPA Rice and Beans,undefined

[35] Biotechnology Laboratory,undefined

[36] Environmental Biology Department,undefined

[37] Centro de Investigaciones Biológicas,undefined

[38] (CSIC),undefined

[39] Universidad Nacional Autónoma de México,undefined

[40] Mision Biológica de Galicia (MBG)-National Spanish Research Council (CSIC),undefined

[41] Institució Catalana de Recerca i Estudis Avançats (ICREA),undefined

[42] IMIM (Hospital del Mar Medical Research Institute),undefined

来源：

Genome Biology | / 17卷

关键词：

Common bean; BAT93; Gene duplication; Tissue expression; Transcriptome; lncRNAs;

D O I：

暂无

中图分类号：

学科分类号：

摘要：

引用

共 407 条

[1]

Graham PH(2003)Legumes: importance and constraints to greater use Plant Physiol. 131 872-7

[2]

Vance CP(1995)Identification of presumed ancestral DNA sequences of phaseolin in Phaseolus vulgaris Proc Natl Acad Sci U S A. 92 1101-4

[3]

Kami J(2009)Structure of genetic diversity in the two major gene pools of common bean (Phaseolus vulgaris L., Fabaceae) Theor Appl Genet 118 979-92

[4]

Velásquez VB(2012)Mesoamerican origin of the common bean (Phaseolus vulgaris L.) is revealed by sequence data Proc Natl Acad Sci U S A 109 E788-96

[5]

Debouck DG(2013)Demographic factors shaped diversity in the two gene pools of wild common bean Phaseolus vulgaris L Heredity (Edinb) 110 267-76

[6]

Gepts P(2014)A reference genome for common bean and genome-wide analysis of dual domestications Nat Genet. 46 707-13

[7]

Kwak M(2011)Investigation of the domestication of common bean (Phaseolus vulgaris) using multilocus sequence data Funct Plant Biol. 38 953-67

[8]

Gepts P(1998)Origin and evolution of common bean: Past events and recent trends HortScience. 33 1124-30

[9]

Bitocchi E(2005)Domestication patterns in common bean (Phaseolus vulgaris L.) and the origin of the Mesoamerican and Andean cultivated races Theor Appl Genet 110 432-44

[10]

Nanni L(2006)Phylogeny of the genus Phaseolus (Leguminosae): a recent diversification in an ancient landscape Syst Bot. 31 779-91

← 1 2 3 4 5 6 7 8 9 10 →