StructRNAfinder: an automated pipeline and web server for RNA families prediction

[1] Mattick JS(2010)The central role of RNA in the genetic programming of complex organisms An Acad Bras Cienc 82 933-939

[2] Griffiths-Jones S(2005)Rfam: annotating non-coding RNAs in complete genomes Nucleic Acids Res 33 D121-D124

[3] Moxon S(2011)ViennaRNA Package 2.0 Algorithms Mol. Biol. 6 26-W497

[4] Marshall M(2015)Web-beagle: a web server for the alignment of RNA secondary structures Nucleic Acids Res 43 W493-W377

[5] Khanna A(2010)Freiburg RNA tools: a web server integrating INTARNA, EXPARNA and LOCARNA Nucleic Acids Res 38 W373-629

[6] Eddy SR(1986)Biological catalysis by RNA Annu Rev Biochem 55 599-49

[7] Bateman A(2008)Computational methods in noncoding RNA research J Math Biol 56 15-50

[8] Lorenz R(1995)Finding the hairpin in the haystack: searching for RNA motifs Trends Genet 11 45-164

[9] Bernhart SH(2008)SnoReport: computational identification of snoRNAs with unknown targets Bioinformatics 24 158-e202

[10] Höner Zu Siederdissen C(2006)Hairpins in a haystack: recognizing microRNA precursors in comparative genomics data Bioinformatics 22 e197-737

[1] Mattick JS(2010)The central role of RNA in the genetic programming of complex organisms An Acad Bras Cienc 82 933-939

[2] Griffiths-Jones S(2005)Rfam: annotating non-coding RNAs in complete genomes Nucleic Acids Res 33 D121-D124

[3] Moxon S(2011)ViennaRNA Package 2.0 Algorithms Mol. Biol. 6 26-W497

[4] Marshall M(2015)Web-beagle: a web server for the alignment of RNA secondary structures Nucleic Acids Res 43 W493-W377

[5] Khanna A(2010)Freiburg RNA tools: a web server integrating INTARNA, EXPARNA and LOCARNA Nucleic Acids Res 38 W373-629

[6] Eddy SR(1986)Biological catalysis by RNA Annu Rev Biochem 55 599-49

[7] Bateman A(2008)Computational methods in noncoding RNA research J Math Biol 56 15-50

[8] Lorenz R(1995)Finding the hairpin in the haystack: searching for RNA motifs Trends Genet 11 45-164

[9] Bernhart SH(2008)SnoReport: computational identification of snoRNAs with unknown targets Bioinformatics 24 158-e202

[10] Höner Zu Siederdissen C(2006)Hairpins in a haystack: recognizing microRNA precursors in comparative genomics data Bioinformatics 22 e197-737