Structural basis for high-affinity fluorophore binding and activation by RNA Mango

被引:0
|
作者
Robert J Trachman
Natalia A Demeshkina
Matthew W L Lau
Shanker Shyam S Panchapakesan
Sunny C Y Jeng
Peter J Unrau
Adrian R Ferré-D'Amaré
机构
[1] Biochemistry and Biophysics Center,Department of Molecular Biology and Biochemistry
[2] National Heart,undefined
[3] Lung and Blood Institute,undefined
[4] Simon Fraser University,undefined
[5] Burnaby,undefined
来源
Nature Chemical Biology | 2017年 / 13卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
A crystal structure of the RNA aptamer Mango bound to a thiazole orange–derived fluorophore reveals a three-tiered G-quadruplex structure, which, together with three flap-like nucleotides, constrains the fluorophore into its active conformation.[graphic not available: see fulltext]
引用
收藏
页码:807 / 813
页数:6
相关论文
共 50 条
  • [1] Structural basis for high-affinity fluorophore binding and activation by RNA Mango
    Trachman, Robert J., III
    Demeshkina, Natalia A.
    Lau, Matthew W. L.
    Panchapakesan, Shanker Shyam S.
    Jeng, Sunny C. Y.
    Unrau, Peter J.
    Ferre-D'Amare, Adrian R.
    NATURE CHEMICAL BIOLOGY, 2017, 13 (07) : 807 - +
  • [2] RNA Mango Aptamer-Fluorophore: A Bright, High-Affinity Complex for RNA Labeling and Tracking
    Dolgosheina, Elena V.
    Jeng, Sunny C. Y.
    Panchapakesan, Shanker Shyam S.
    Cojocaru, Razvan
    Chen, Patrick S. K.
    Wilson, Peter D.
    Hawkins, Nancy
    Wiggins, Paul A.
    Unrau, Peter J.
    ACS CHEMICAL BIOLOGY, 2014, 9 (10) : 2412 - 2420
  • [3] Structural basis of RasGRP binding to high-affinity PKC ligands
    Rong, SB
    Enyedy, IJ
    Qiao, LX
    Zhao, LY
    Ma, DW
    Pearce, LL
    Lorenzo, PS
    Stone, JC
    Blumberg, PM
    Wang, SM
    Kozikowski, AP
    JOURNAL OF MEDICINAL CHEMISTRY, 2002, 45 (04) : 853 - 860
  • [4] Structural basis for high-affinity binding of LEDGF PWWP to mononucleosomes
    Eidahl, Jocelyn O.
    Crowe, Brandon L.
    North, Justin A.
    McKee, Christopher J.
    Shkriabai, Nikoloz
    Feng, Lei
    Plumb, Matthew
    Graham, Robert L.
    Gorelick, Robert J.
    Hess, Sonja
    Poirier, Michael G.
    Foster, Mark P.
    Kvaratskhelia, Mamuka
    NUCLEIC ACIDS RESEARCH, 2013, 41 (06) : 3924 - 3936
  • [5] Structural basis for high-affinity phosphoinositide binding by pleckstrin homology domains
    Lemmon, MA
    BIOCHEMICAL SOCIETY TRANSACTIONS, 1999, 27 (04) : 617 - 624
  • [6] THE INSULIN-RECEPTOR - STRUCTURAL BASIS FOR HIGH-AFFINITY LIGAND-BINDING
    BONISCHNETZLER, M
    SCOTT, W
    WAUGH, SM
    DIBELLA, E
    PILCH, PF
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1987, 262 (17) : 8395 - 8401
  • [7] BINDING AND STRUCTURAL-ANALYSIS OF HIGH-AFFINITY RNA LIGANDS TO HUMAN THROMBIN
    MCBRIDE, B
    SCHNEIDER, D
    DAKIS, K
    TASSET, D
    BLOOD, 1993, 82 (10) : A276 - A276
  • [8] Molecular basis for high-affinity agonist binding in GPCRs
    Warne, Tony
    Edwards, Patricia C.
    Dore, Andrew S.
    Leslie, Andrew G. W.
    Tate, Christopher G.
    SCIENCE, 2019, 364 (6442) : 775 - +
  • [9] Structural basis for high-affinity HER2 receptor binding by an engineered protein
    Eigenbrot, Charles
    Ultsch, Mark
    Dubnovitsky, Anatoly
    Abrahmsen, Lars
    Hard, Torleif
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (34) : 15039 - 15044
  • [10] STRUCTURAL ORIGINS OF HIGH-AFFINITY BIOTIN BINDING TO STREPTAVIDIN
    WEBER, PC
    OHLENDORF, DH
    WENDOLOSKI, JJ
    SALEMME, FR
    SCIENCE, 1989, 243 (4887) : 85 - 88