Genomic prediction based on selective linkage disequilibrium pruning of low-coverage whole-genome sequence variants in a pure Duroc population

[21] Amer P(2015)Sequence- vs. chip-assisted genomic selection: accurate biological information is advised Genet Sel Evol 47 43-575

[22] Gorjanc G(2019)Using imputation-based whole-genome sequencing data to improve the accuracy of genomic prediction for combined populations in pigs Genet Sel Evol 51 58-61

[23] Wartha CA(2016)Genomic prediction using pre-selected DNA variants from a GWAS with whole-genome sequence data in Holstein-Friesian cattle Genet Sel Evol 48 95-1296

[24] Lorenz AJ(2022)Genomic prediction with whole-genome sequence data in intensely selected pig lines Genet Sel Evol 54 65-49

[25] Chatterjee N(2010)Accurate prediction of genetic values for complex traits by whole-genome resequencing Genetics 185 623-1883

[26] Shi JX(2015)Genomic prediction using imputed whole-genome sequence data in Holstein Friesian cattle Genet Sel Evol 47 71-undefined

[27] Garcia-Closas M(2015)Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation Nat Commun 6 8658-undefined

[28] VanRaden PM(2021)Accelerated deciphering of the genetic architecture of agricultural economic traits in pigs using a low-coverage whole-genome sequencing strategy Gigascience 10 giab048-undefined

[29] Habier D(2011)A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species PLoS One 6 e19379-undefined

[30] Fernando RL(2017)Genome-wide association study and accuracy of genomic prediction for teat number in Duroc pigs using genotyping-by-sequencing Genet Sel Evol 49 35-undefined

[21] Amer P(2015)Sequence- vs. chip-assisted genomic selection: accurate biological information is advised Genet Sel Evol 47 43-575

[22] Gorjanc G(2019)Using imputation-based whole-genome sequencing data to improve the accuracy of genomic prediction for combined populations in pigs Genet Sel Evol 51 58-61

[23] Wartha CA(2016)Genomic prediction using pre-selected DNA variants from a GWAS with whole-genome sequence data in Holstein-Friesian cattle Genet Sel Evol 48 95-1296

[24] Lorenz AJ(2022)Genomic prediction with whole-genome sequence data in intensely selected pig lines Genet Sel Evol 54 65-49

[25] Chatterjee N(2010)Accurate prediction of genetic values for complex traits by whole-genome resequencing Genetics 185 623-1883

[26] Shi JX(2015)Genomic prediction using imputed whole-genome sequence data in Holstein Friesian cattle Genet Sel Evol 47 71-undefined

[27] Garcia-Closas M(2015)Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation Nat Commun 6 8658-undefined

[28] VanRaden PM(2021)Accelerated deciphering of the genetic architecture of agricultural economic traits in pigs using a low-coverage whole-genome sequencing strategy Gigascience 10 giab048-undefined

[29] Habier D(2011)A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species PLoS One 6 e19379-undefined

[30] Fernando RL(2017)Genome-wide association study and accuracy of genomic prediction for teat number in Duroc pigs using genotyping-by-sequencing Genet Sel Evol 49 35-undefined