Functional annotation signatures of disease susceptibility loci improve SNP association analysis

[1] Manolio TA(2010)Genomewide association studies and assessment of the risk of disease N Engl J Med 363 166-176

[2] Freedman ML(2011)Principles for the post–GWAS functional characterization of cancer risk loci Nat Genet 43 513-518

[3] Monteiro ANA(1994)Hierarchical regression analysis applied to a study of multiple dietary exposures and breast cancer Epidemiology 5 612-621

[4] Gayther SA(1997)Hierarchical modeling of gene-environment interactions: estimating NAT2 genotype–specific dietary effects on adenomatous polyps Cancer Epidemiol Biomarkers & Prev 6 307-314

[5] Coetzee GA(2004)Using hierarchical modeling in genetic association studies with multiple markers: application to a case-control study of bladder cancer Cancer Epidemiol Biomarkers & Prev 13 1013-1021

[6] Risch A(2007)Inherited predisposition of lung cancer: a hierarchical modeling approach to DNA repair and cell cycle control pathways Cancer Epidemiol Biomarkers & Prev 16 2736-2744

[7] Plass C(2008)High-resolution mapping of expression-QTLs yields insight into human gene regulation PLoS Genet 4 1000214-9367

[8] Casey G(2009)Potential etiologic and functional implications of genome-wide association loci for human diseases and traits Proc Nat Acad Sci 106 9362-1759

[9] Biasi MD(2009)Learning a prior on regulatory potential from eQTL data PLoS Genet 5 1000358-913

[10] Carlson C(2010)Trait–associated SNPs are more likely to be eQTLs: Annotation to enhance discovery from GWAS PLoS Genet 6 1000888-227

[1] Manolio TA(2010)Genomewide association studies and assessment of the risk of disease N Engl J Med 363 166-176

[2] Freedman ML(2011)Principles for the post–GWAS functional characterization of cancer risk loci Nat Genet 43 513-518

[3] Monteiro ANA(1994)Hierarchical regression analysis applied to a study of multiple dietary exposures and breast cancer Epidemiology 5 612-621

[4] Gayther SA(1997)Hierarchical modeling of gene-environment interactions: estimating NAT2 genotype–specific dietary effects on adenomatous polyps Cancer Epidemiol Biomarkers & Prev 6 307-314

[5] Coetzee GA(2004)Using hierarchical modeling in genetic association studies with multiple markers: application to a case-control study of bladder cancer Cancer Epidemiol Biomarkers & Prev 13 1013-1021

[6] Risch A(2007)Inherited predisposition of lung cancer: a hierarchical modeling approach to DNA repair and cell cycle control pathways Cancer Epidemiol Biomarkers & Prev 16 2736-2744

[7] Plass C(2008)High-resolution mapping of expression-QTLs yields insight into human gene regulation PLoS Genet 4 1000214-9367

[8] Casey G(2009)Potential etiologic and functional implications of genome-wide association loci for human diseases and traits Proc Nat Acad Sci 106 9362-1759

[9] Biasi MD(2009)Learning a prior on regulatory potential from eQTL data PLoS Genet 5 1000358-913

[10] Carlson C(2010)Trait–associated SNPs are more likely to be eQTLs: Annotation to enhance discovery from GWAS PLoS Genet 6 1000888-227