Aberrantly methylated-differentially genes and pathways among Iranian patients with colorectal cancer

被引:0
作者
Mahla Ghorbani
Marjan Azghandi
Mohammad Amin Kerachian
机构
[1] Islamic Azad University,Department of Biology, Faculty of Sciences, Mashhad Branch
[2] Reza Radiotherapy and Oncology Center,Cancer Genetics Research Unit
[3] Ferdowsi University of Mashhad,Department of Animal Science, Faculty of Agriculture
[4] Mashhad University of Medical Sciences,Medical Genetics Research Center
[5] Mashhad University of Medical Sciences,Department of Medical Genetics, Faculty of Medicine
来源
Cancer Cell International | / 21卷
关键词
Diagnostic; Colon adenocarcinoma; Epigenetic; In silico; Methylation;
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[11]  
Maurel J(2009)Advantages of next-generation sequencing versus the microarray in epigenetic research Briefings Funct Genom Proteom 8 174-D10
[12]  
Kerachian MA(2020)Crosstalk between DNA methylation and gene expression in colorectal cancer, a potential plasma biomarker for tracing this tumor Sci Rep. 10 2813-15
[13]  
Javadmanesh A(2009)PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium Nucleic Acids Resh. 38 D204-5
[14]  
Azghandi M(2018)DMRFusion: A differentially methylated region detection tool based on the ranked fusion method Genomics. 7 547-1841
[15]  
Shariatpanahi AM(2004)affy–analysis of Affymetrix GeneChip data at the probe level Bioinformatics. 20 307-30
[16]  
Yassi M(2013)NCBI GEO: archive for functional genomics data sets–update Nucleic Acids Res. 41 D991-7
[17]  
Davodly ES(2015)MethylMix: an R package for identifying DNA methylation-driven genes Bioinformatics 31 1839-34
[18]  
Rokni P(2003)DAVID: database for annotation, visualization, and integrated discovery Genome Biol 4 R60-61
[19]  
Shariatpanahi AM(2000)KEGG: kyoto encyclopedia of genes and genomes PLos ONE. 28 27-2
[20]  
Sakhinia E(2014)KEGG-PATH: Kyoto encyclopedia of genes and genomes-based pathway analysis using a path analysis model Mol Biosyst. 10 2441-934