Variibacter gotjawalensis gen. nov., sp. nov., isolated from soil of a lava forest

被引:0
作者
Kwang Kyu Kim
Keun Chul Lee
Mi Kyung Eom
Jong-Shik Kim
Dae-Shin Kim
Suk-Hyung Ko
Byung-Hyuk Kim
Jung-Sook Lee
机构
[1] Korea Research Institute of Bioscience and Biotechnology,Korean Collection for Type Cultures, Biological Resource Center
[2] Gyeongbuk Institute for Marine Bioindustry,Environmental Biotechnology Research Center
[3] Research Institute for Hallasan,undefined
[4] Korea Research Institute of Bioscience and Biotechnology,undefined
来源
Antonie van Leeuwenhoek | 2014年 / 105卷
关键词
gen. nov., sp. nov.; Proteobacteria; Taxonomy;
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摘要
A novel bacterial strain designated GJW-30T was isolated from soil of the lava forest, Gotjawal, located in Aewol, Jeju, Korea. Strain GJW-30T was found to be strictly aerobic, Gram-negative and to form pleomorphic, non-motile rods and white colonies on R2A agar. The major fatty acids were identified as C18:1ω7c, C16:0 and C17:0, the predominant isoprenoid quinone as Q-10, the polar lipids as diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an unidentified aminolipid and an unidentified lipid. The cell-wall sugar pattern of strain GJW-30T was found to be composed of glucose, ribose and rhamnose and meso-DAP as the diagnostic diamino acid in the cell-wall peptidoglycan. The DNA G+C content of strain GJW-30T is 62.2 mol%. Phylogenetic analysis, based on 16S rRNA gene sequence similarities, showed that strain GJW-30T forms a deep branch within the order Rhizobiales, sharing the highest level of sequence homology with Bradyrhizobium oligotrophicum LMG 10732T (93.6 %). On the basis of the phenotypic, chemotaxonomic and phylogenetic characteristics, strain GJW-30T is considered to represent a novel genus and species, for which the name Variibacter gotjawalensis gen. nov., sp. nov. (the type strain is GJW-30T = KCTC 32391T = CECT 8514T = LMG 28093T) is proposed.
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页码:915 / 924
页数:9
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共 127 条
[1]  
Auling G(1988)Phylogenetic heterogeneity and chemotaxonomic properties of certain Gram-negative aerobic carboxydobacteria Syst Appl Microbiol 10 264-272
[2]  
Busse J(1991)Proposal of J Clin Microbiol 29 2450-2460
[3]  
Hahn M(1996) gen. nov. with Int J Syst Bacteriol 46 981-987
[4]  
Hennecke H(2012) sp. Nov. (formerly the cat scratch disease bacillus) Syst Appl Microbiol 35 205-214
[5]  
Kropprnstedt RM(1981) sp. nov. (formerly the Cleveland Clinic Foundation strain) J Mol Evol 17 368-376
[6]  
Probst A(1985) sp. nov. and three unnamed genospecies Evolution 39 783-791
[7]  
Stackebrandt E(1971)Oxidation of thiosulfate by a new bacterium, Syst Zool 20 406-416
[8]  
Brenner DJ(1955) (strain BI-42) gen. nov., sp. nov.: analysis of phylogeny based on chemotaxonomy and 16S ribosomal DNA sequencing Methods Enzymol 1 138-146
[9]  
Hollis DG(1999) gen. nov., sp. nov., a new genus in the family Nucleic Acids Symp Ser 41 95-98
[10]  
Moss CW(1994) isolated from Int J Syst Bacteriol 29 56-58