Evaluation of methods to purify virus-like particles for metagenomic sequencing of intestinal viromes

[11] Qin J(2013)Resident viruses and their interactions with the immune system Nat Immunol 14 654-9

[12] Li R(2013)Bacteriophages as pathogens and immune modulators? mBio 4 e00868-13

[13] Raes J(2013)Bacteriophage adhering to mucus provide a non–host-derived immunity Proc Natl Acad Sci USA 110 10771-6

[14] Arumugam M(2013)Gnotobiotic mouse model of phage–bacterial host dynamics in the human gut Proc Natl Acad Sci USA 110 20236-41

[15] Burgdorf KS(2012)Going viral: next-generation sequencing applied to phage populations in the human gut Nat Rev Microbiol 10 607-17

[16] Manichanh C(2013)Evaluation of methods to concentrate and purify ocean virus communities through comparative, replicated metagenomics Environ Microbiol 15 1428-40

[17] Nielsen T(2013)Sequencing platform and library preparation choices impact viral metagenomes BMC Genomics 14 320-37

[18] Pons N(2012)Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method Environ Microbiol 14 2526-4

[19] Levenez F(2010)Multiple displacement amplification compromises quantitative analysis of metagenomes Nat Meth 7 943-7

[20] Yamada T(2014)Caught in the middle with multiple displacement amplification: the myth of pooling for avoiding multiple displacement amplification bias in a metagenome Microbiome 2 3-83

[11] Qin J(2013)Resident viruses and their interactions with the immune system Nat Immunol 14 654-9

[12] Li R(2013)Bacteriophages as pathogens and immune modulators? mBio 4 e00868-13

[13] Raes J(2013)Bacteriophage adhering to mucus provide a non–host-derived immunity Proc Natl Acad Sci USA 110 10771-6

[14] Arumugam M(2013)Gnotobiotic mouse model of phage–bacterial host dynamics in the human gut Proc Natl Acad Sci USA 110 20236-41

[15] Burgdorf KS(2012)Going viral: next-generation sequencing applied to phage populations in the human gut Nat Rev Microbiol 10 607-17

[16] Manichanh C(2013)Evaluation of methods to concentrate and purify ocean virus communities through comparative, replicated metagenomics Environ Microbiol 15 1428-40

[17] Nielsen T(2013)Sequencing platform and library preparation choices impact viral metagenomes BMC Genomics 14 320-37

[18] Pons N(2012)Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method Environ Microbiol 14 2526-4

[19] Levenez F(2010)Multiple displacement amplification compromises quantitative analysis of metagenomes Nat Meth 7 943-7

[20] Yamada T(2014)Caught in the middle with multiple displacement amplification: the myth of pooling for avoiding multiple displacement amplification bias in a metagenome Microbiome 2 3-83