Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana

被引:0
作者
Athanasios Theologis
Joseph R. Ecker
Curtis J. Palm
Nancy A. Federspiel
Samir Kaul
Owen White
Jose Alonso
Hootan Altafi
Rina Araujo
Cheryl L. Bowman
Shelise Y. Brooks
Eugen Buehler
April Chan
Qimin Chao
Huaming Chen
Rosa F. Cheuk
Christina W. Chin
Mike K. Chung
Lane Conn
Aaron B. Conway
Andrew R. Conway
Todd H. Creasy
Ken Dewar
Patrick Dunn
Pelin Etgu
Tamara V. Feldblyum
JiDong Feng
Betty Fong
Claire Y. Fujii
John E. Gill
Andrew D. Goldsmith
Brian Haas
Nancy F. Hansen
Beth Hughes
Lucas Huizar
Jonathan L. Hunter
Jennifer Jenkins
Chanda Johnson-Hopson
Shehnaz Khan
Elizabeth Khaykin
Christopher J. Kim
Hean L. Koo
Irina Kremenetskaia
David B. Kurtz
Andrea Kwan
Bao Lam
Stephanie Langin-Hooper
Andrew Lee
Jeong M. Lee
Catherine A. Lenz
机构
[1] Plant Gene Expression Center/USDA-U.C. Berkeley,Department of Biology
[2] Plant Science Institute,Department of Physics and Astronomy
[3] University of Pennsylvania,undefined
[4] Stanford Genome Technology Center ,undefined
[5] The Institute for Genomic Research,undefined
[6] Exelixis,undefined
[7] Inc.,undefined
[8] The Salk Institute for Biological Studies,undefined
[9] DNA Sciences,undefined
[10] Inc.,undefined
[11] University of British Columbia,undefined
[12] Celera Genomics,undefined
[13] Inc.,undefined
来源
Nature | 2000年 / 408卷
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摘要
The genome of the flowering plant Arabidopsis thaliana has five chromosomes1,2. Here we report the sequence of the largest, chromosome 1, in two contigs of around 14.2 and 14.6 megabases. The contigs extend from the telomeres to the centromeric borders, regions rich in transposons, retrotransposons and repetitive elements such as the 180-base-pair repeat. The chromosome represents 25% of the genome and contains about 6,850 open reading frames, 236 transfer RNAs (tRNAs) and 12 small nuclear RNAs. There are two clusters of tRNA genes at different places on the chromosome. One consists of 27 tRNAPro genes and the other contains 27 tandem repeats of tRNATyr-tRNATyr-tRNASergenes. Chromosome 1 contains about 300 gene families with clustered duplications. There are also many repeat elements, representing 8% of the sequence.
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页码:816 / 820
页数:4
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