The complete DNA sequence of the mitochondrial genome of Sinonovacula constricta (Bivalvia: Solecurtidae)

被引:0
作者
Runling Zheng
Jiale Li
Donghong Niu
机构
[1] Shanghai Ocean University,Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources
[2] Ministry of Education,Aquaculture Division
[3] E-Institute of Shanghai Universities,undefined
来源
Acta Oceanologica Sinica | 2010年 / 29卷
关键词
Mitochondrial DNA;
D O I
暂无
中图分类号
学科分类号
摘要
The nucleotide sequence of the mitochondrial genome of the solecurtidae Bivalvia mollusca Sinonovacula constricta (GenBank accession number EU880278) has been determined and is reported here. We determined the complete mitochondrial genome sequence using long-PCR and Shot Gun Sequencing. Contained within the 17 225 base pairs (bp) are the two ribosomal RNA genes and 12 protein coding genes typical of metazoan mitochondrial genomes. The S. constricta mitochondrial DNA (mtDNA) did not contain a gene for atp8, similar to the mtDNA of Crassostrea virginica, Crassostrea giga and Mytilus edulis. The S. constricta mtDNA is 67.0% A+T (A 25.9%, C 10.5%, G 22.5%, and T 41.1%). This value is higher than that for many invertebrate mitochondrial genomes. Only 19 putative tRNA genes are present in S. constricta and 27 noncoding regions, of which two are large in size. The trnE and trnW genes as well as a second trnS were absent in S. constricta. The gene arrangement of S. constricta is different from the other Bivalvia genomes.
引用
收藏
页码:88 / 92
页数:4
相关论文
共 40 条
  • [1] Boore J. L.(2006)The complete sequence of the mitochondrial genome of BMC Genomics 7 182-194
  • [2] Boore J. L.(1999) (Mollusca: Cephalopoda) Nucleic Acids Res 27 1767-1780
  • [3] Boore J. L.(1994)Animal mitochondrial genomes Genetics 138 423-443
  • [4] Brown W. M.(1994)Complete DNA sequence of the mitochondrial genome of the Black Chiton, Mol Mar Biol Biotech 3 294-299
  • [5] Folmer O.(1988)DNA pirmers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates Nucleic Acids Res 16 5841-5861
  • [6] Black M.(2001)Comparisons of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis Mol Biol Evol 18 1734-1744
  • [7] Hoeh W.(2006)The complete mitochondrial genome of a lophophorate, the brachiopod Front Zool 3 13-412
  • [8] Foran D. R.(1992)The complete sequences and gene organisation of the mitochondrial genomes of the heterodont bivalves Genetics 131 397-217
  • [9] Hixson J. E.(1988) and J Mol Biol 202 185-964
  • [10] Brown W. M.(1997) and the first record for a putative Atpase subunit 8 gene in marine bivalves Nucleic Acids Research 25 955-712