Genome-wide association study and meta-analysis of intraocular pressure

被引:0
作者
A. Bilge Ozel
Sayoko E. Moroi
David M. Reed
Melisa Nika
Caroline M. Schmidt
Sara Akbari
Kathleen Scott
Frank Rozsa
Hemant Pawar
David C. Musch
Paul R. Lichter
Doug Gaasterland
Kari Branham
Jesse Gilbert
Sarah J. Garnai
Wei Chen
Mohammad Othman
John Heckenlively
Anand Swaroop
Gonçalo Abecasis
David S. Friedman
Don Zack
Allison Ashley-Koch
Megan Ulmer
Jae H. Kang
Yutao Liu
Brian L. Yaspan
Jonathan Haines
R. Rand Allingham
Michael A. Hauser
Louis Pasquale
Janey Wiggs
Julia E. Richards
Jun Z. Li
机构
[1] University of Michigan,Department of Human Genetics
[2] University of Michigan,Department of Ophthalmology and Visual Sciences
[3] University of Michigan,Department of Epidemiology
[4] Eye Doctors of Washington DC,Division of Pulmonary Medicine, Allergy and Immunology, Children’s Hospital of Pittsburgh
[5] University of Pittsburgh Medical School,Departments of Biostatistics and Human Genetics
[6] University of Pittsburgh,National Eye Institute
[7] National Institutes of Health,Department of Biostatistics
[8] University of Michigan,Department of Ophthalmology
[9] Johns Hopkins University School of Medicine,Center for Human Genetics
[10] Duke University School of Medicine,Channing Division of Network Medicine
[11] Brigham and Women’s Hospital,Center for Human Genetics Research
[12] Vanderbilt University School of Medicine,Department of Ophthalmology, Harvard Medical School
[13] Massachusetts Eye and Ear Infirmary,undefined
来源
Human Genetics | 2014年 / 133卷
关键词
Glaucoma; Central Corneal Thickness; Glaucomatous Optic Neuropathy; Positive Beta; Lead SNPs;
D O I
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中图分类号
学科分类号
摘要
Elevated intraocular pressure (IOP) is a major risk factor for glaucoma and is influenced by genetic and environmental factors. Recent genome-wide association studies (GWAS) reported associations with IOP at TMCO1 and GAS7, and with primary open-angle glaucoma (POAG) at CDKN2B-AS1, CAV1/CAV2, and SIX1/SIX6. To identify novel genetic variants and replicate the published findings, we performed GWAS and meta-analysis of IOP in >6,000 subjects of European ancestry collected in three datasets: the NEI Glaucoma Human genetics collaBORation, GLAUcoma Genes and ENvironment study, and a subset of the Age-related Macular Degeneration-Michigan, Mayo, AREDS and Pennsylvania study. While no signal achieved genome-wide significance in individual datasets, a meta-analysis identified significant associations with IOP at TMCO1 (rs7518099-G, p = 8.0 × 10−8). Focused analyses of five loci previously reported for IOP and/or POAG, i.e., TMCO1, CDKN2B-AS1, GAS7, CAV1/CAV2, and SIX1/SIX6, revealed associations with IOP that were largely consistent across our three datasets, and replicated the previously reported associations in both effect size and direction. These results confirm the involvement of common variants in multiple genomic regions in regulating IOP and/or glaucoma risk.
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页码:41 / 57
页数:16
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