Genome-wide characterization of non-reference transposable element insertion polymorphisms reveals genetic diversity in tropical and temperate maize

被引:0
作者
Xianjun Lai
James C. Schnable
Zhengqiao Liao
Jie Xu
Gengyun Zhang
Chuan Li
Erliang Hu
Tingzhao Rong
Yunbi Xu
Yanli Lu
机构
[1] Sichuan Agricultural University,Maize Research Institute
[2] Chinese Academy of Agricultural Sciences,Institute of Crop Science
[3] Bejing Genomics Institute (BGI)-Shenzhen,Department of Agronomy and Horticulture
[4] University of Nebraska-Lincoln,undefined
[5] International Maize and Wheat Improvement Center (CIMMYT),undefined
[6] El Batan,undefined
来源
BMC Genomics | / 18卷
关键词
Adaptation; Genetic recombination; GWAS; Maize; Transposable elements; Non-redundant TEs (NRTE);
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[1]  
Matsuoka Y(2002)A single domestication for maize shown by multilocus microsatellite genotyping Proc Natl Acad Sci USA 99 6080-6084
[2]  
Vigouroux Y(2009)Starch grain and phytolith evidence for early ninth millennium B.P. Maize from the central Balsas River valley, Mexico Proc Natl Acad Sci USA 106 5019-5024
[3]  
Goodman MM(2012)Preceramic maize from Paredones and Huaca Prieta, Peru Proc Natl Acad Sci USA 109 1755-1759
[4]  
Sanchez GJ(2013)Evidence for maize (Zea Mays) in the late archaic (3000-1800 B.C.) in the Norte Chico region of Peru Proc Natl Acad Sci USA 110 4945-4949
[5]  
Buckler E(2013)Evolution of crop species: genetics of domestication and diversification Nat Rev Genet 14 840-852
[6]  
Doebley J(2012)Comparative population genomics of maize domestication and improvement Nat Genet 44 808-811
[7]  
Piperno DR(2012)Maize genetic diversity and association mapping using transposable element insertion polymorphisms Theor Appl Genet 124 1521-1537
[8]  
Ranere AJ(2006)Genetics: junk DNA as an evolutionary force Nature 443 521-524
[9]  
Holst I(2009)Transposable elements in gene regulation and in the evolution of vertebrate genomes Curr Opin Genet Dev 19 607-612
[10]  
Iriarte J(2013)How important are transposons for plant evolution? Nat Rev Genet 14 49-61