Comparison of a novel antigen detection test with reverse transcription polymerase chain reaction assay for laboratory diagnosis of SARS-CoV-2 infection

被引:0
|
作者
Osman Sezer Cirit
Esvet Mutlu
Banu Sancak
Tanil Kocagöz
Özge Can
Candan Çicek
Ayca Arzu Sayiner
Özgür Appak
Neval Yurttutan Uyar
Canan Külah
Aysegül Çopur Çiçek
Osman Birol Özgümüs
Yasemin Ay Altintop
Esma Saatçi
Tekin Karsligil
Yasemin Zer
Nevgün Sepin Özen
Yesim Çekin
Zeynep Ceren Karahan
Ebru Evren
Ayse Esra Karakoç
Sultan Gülbahçe Orhan
Derya Mutlu
Tugba Bozdemir
Yeliz Tanriverdi Çayci
Canberk Çinar
Meltem Tasbakan
Merve Mert
Ece Çinar
Oya Özlem Eren Kutsoylu
Sesin Kocagöz
Ayse Ertürk
Ilhami Çelik
Ayse Özlem Mete
Müge Günalp Eneyli
Irem Akdemir
Taliha Karakök
Dilara Inan
Aynur Atilla
Şevket Onur Taflan
Kağan Etka Yörük
机构
[1] Gaziantep Dr. Ersin Arslan Training and Research Hospital Medical Microbiology Laboratory,Faculty of Medicine Department of Medical Microbiology
[2] Akdeniz University,Faculty of Medicine Department of Medical Microbiology
[3] Hacettepe University,School of Medicine Department of Medical Microbiology and Medical Biotechnology
[4] Acibadem University,Faculty of Medicine Department of Medical Microbiology
[5] Acibadem University School of Medical Engineering,School of Medicine Department of Medical Microbiology
[6] Ege University,Faculty of Medicine Department of Medical Microbiology
[7] Dokuz Eylül University Faculty of Medicine Department of Medical Microbiology,Faculty of Medicine Department of Medical Microbiology
[8] Acibadem University,Faculty of Medicine Department of Medical Microbiology
[9] Acibadem Labmed,Faculty of Medicine Department of Medical Microbiology
[10] Recep Tayyip Erdogan University,Faculty of Medicine Department of Infectious Diseases and Clinical Microbiology
[11] Kayseri City Training and Research Hospital Medical Microbiology Laboratory,Faculty of Medicine Department of Physical Medicine and Rehabilitation
[12] Gaziantep University,Department of Infectious Diseases and Clinical Microbiology
[13] University of Health Sciences Antalya Training and Research Hospital Medical Microbiology Laboratory,Faculty of Medicine Department of Infectious Diseases and Clinical Microbiology
[14] Ankara University,Diseases and Clinical Microbiology Department
[15] University of Health Sciences Ankara Training and Research Hospital Medical Microbiology Laboratory,Faculty of Medicine Department of Infectious Diseases and Clinical Microbiology
[16] Ondokuz Mayis University,Faculty of Medicine Department of Emergency Medicine
[17] Ege University,Faculty of Medicine Department of Infectious Diseases and Clinical Microbiology
[18] Ege University,Diseases and Clinical Microbiology Department
[19] Dokuz Eylül University Faculty of Medicine Department of Infectious Diseases and Clinical Microbiology,Faculty of Medicine Department of Infectious Diseases and Clinical Microbiology
[20] Acibadem University School of Medicine,Faculty of Medicine Department of Infectious Diseases and Clinical Microbiology
[21] Recep Tayyip Erdogan University,undefined
[22] Kayseri City Training and Research Hospital Infectious,undefined
[23] Gaziantep University,undefined
[24] Ankara University,undefined
[25] Ankara University,undefined
[26] University of Health Sciences Ankara Training and Research Hospital Infectious,undefined
[27] Akdeniz University,undefined
[28] Ondokuz Mayis University,undefined
[29] Vitrosens Biotechnology,undefined
来源
Infection | 2023年 / 51卷
关键词
COVID-19; Nasopharyngeal swab samples; Rapid antigen test; RT-PCR; SARS-CoV-2;
D O I
暂无
中图分类号
学科分类号
摘要
Molecular diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by real-time reverse transcription polymerase chain reaction (RT-PCR) in respiratory specimens is considered the gold standard method. This method is highly sensitive and specific but it has some limitations such as being expensive and requiring special laboratory equipment and skilled personnel. RapidFor™ Antigen Rapid Test Kit is a commercially available Ag-RDT which is produced in Turkey and designed to detect the nucleocapsid antigen of SARS-CoV-2 in nasopharyngeal swab samples. The aim of this study was to evaluate the performance of this novel SARS-CoV-2 antigen detection considering the RT-PCR method as the gold standard. Four hundred forty-four nasopharyngeal swab samples which were collected from the patients who met clinical criteria of COVID-19 from ten centers in Turkey between September 2020 and February 2021 were included in the study. All the nasopharyngeal swab samples were tested for SARS-CoV-2 RNA using commercial RT-PCR kits (Bioeksen and A1 Lifesciences, İstanbul, Turkey) according to the manufacturer’s instructions. Viral loads were assessed according to the cycle threshold (Ct) values. RapidFor™ SARS-CoV-2 antigen test (Vitrosens Biotechnology, Istanbul, Turkey) was used to investigate the presence of SARS-CoV-2 antigen in all samples following the manufacturer’s instructions. Out of 444 nasopharyngeal swab samples tested, 346 (77.9%) were positive and 98 (22.1%) were negative for SARS-CoV-2 RNA by RTPCR. Overall sensitivity of the RapidFor™. Antigen Rapid Test Kit was 80.3% whereas specificity was found to be 87.8%. Positivity rate of rapid antigen test in samples with Ct values over 25 and below 30 was 82.7%, while it increased to 95.7% in samples 20 ≤ Ct < 25 and reached 100% in samples with Ct values below 20. RapidFor™ SARS-CoV-2 Ag test might be a good choice in the screening of symptomatic and asymptomatic patients and their contacts for taking isolation measures early, with advantages over RT-PCR as being rapid, easy and being applicable in every laboratory and even at point of care.
引用
收藏
页码:91 / 96
页数:5
相关论文
共 50 条
  • [21] Evaluation of Rapid Multiplex Reverse Transcription-Quantitative Polymerase Chain Reaction Assays for SARS-CoV-2 Detection in Individual and Pooled Samples
    Baek, Young-Hyun
    Park, Min-Young
    Lim, Ho-Jae
    Youm, Dong-Jae
    You, Youngshin
    Ahn, Seojin
    Park, Jung-Eun
    Kim, Min-Jin
    Lee, Sun-Hwa
    Sohn, Yong-Hak
    Yang, Yong-Jin
    LIFE-BASEL, 2023, 13 (08):
  • [22] Evaluation of automated antigen detection test for detection of SARS-CoV-2
    Mak, Gannon C. K.
    Lau, Stephen S. Y.
    Wong, Kitty K. Y.
    Chow, Nancy L. S.
    Lau, C. S.
    Ng, Ken H. L.
    Lam, Edman T. K.
    Chan, Rickjason C. W.
    Tsang, Dominic N. C.
    DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2021, 101 (04)
  • [23] An Agreement of Antigen Tests on Oral Pharyngeal Swabs or Less Invasive Testing With Reverse Transcription Polymerase Chain Reaction for Detecting SARS-CoV-2 in Adults: Protocol for a Prospective Nationwide Observational Study
    Schneider, Uffe Vest
    Knudsen, Jenny Dahl
    Koch, Anders
    Kirkby, Nikolai Soren
    Lisby, Jan Gorm
    JMIR RESEARCH PROTOCOLS, 2022, 11 (05):
  • [24] Rapid SARS-CoV-2 antigen detection assay in comparison with real-time RT-PCR assay for laboratory diagnosis of COVID-19 in Thailand
    Chutikarn Chaimayo
    Bualan Kaewnaphan
    Nattaya Tanlieng
    Niracha Athipanyasilp
    Rujipas Sirijatuphat
    Methee Chayakulkeeree
    Nasikarn Angkasekwinai
    Ruengpung Sutthent
    Nattawut Puangpunngam
    Theerawoot Tharmviboonsri
    Orawan Pongraweewan
    Suebwong Chuthapisith
    Yongyut Sirivatanauksorn
    Wannee Kantakamalakul
    Navin Horthongkham
    Virology Journal, 17
  • [25] Rapid SARS-CoV-2 antigen detection assay in comparison with real-time RT-PCR assay for laboratory diagnosis of COVID-19 in Thailand
    Chaimayo, Chutikarn
    Kaewnaphan, Bualan
    Tanlieng, Nattaya
    Athipanyasilp, Niracha
    Sirijatuphat, Rujipas
    Chayakulkeeree, Methee
    Angkasekwinai, Nasikarn
    Sutthent, Ruengpung
    Puangpunngam, Nattawut
    Tharmviboonsri, Theerawoot
    Pongraweewan, Orawan
    Chuthapisith, Suebwong
    Sirivatanauksorn, Yongyut
    Kantakamalakul, Wannee
    Horthongkham, Navin
    VIROLOGY JOURNAL, 2020, 17 (01)
  • [26] Rapid Serological Assays and SARS-CoV-2 Real-Time Polymerase Chain Reaction Assays for the Detection of SARS-CoV-2: Comparative Study
    Paradiso, Angelo Virgilio
    De Summa, Simona
    Loconsole, Daniela
    Procacci, Vito
    Sallustio, Anna
    Centrone, Francesca
    Silvestris, Nicola
    Cafagna, Vito
    De Palma, Giuseppe
    Tufaro, Antonio
    Garrisi, Vito Michele
    Chironna, Maria
    JOURNAL OF MEDICAL INTERNET RESEARCH, 2020, 22 (10)
  • [27] Extraction-Free Methods for the Detection of SARS-CoV-2 by Reverse Transcription-PCR: a Comparison with the Cepheid Xpert Xpress SARS-CoV-2 Assay across Two Medical Centers
    Cameron, Andrew
    Pecora, Nicole D.
    Pettengill, Matthew A.
    JOURNAL OF CLINICAL MICROBIOLOGY, 2021, 59 (02)
  • [28] Considerations in Real-time Reverse Transcription Polymerase Chain Reaction (rRT-PCR) for the Detection of SARS-CoV-2 from Nasopharyngeal Swabs
    Sekar, Priyadharshini
    Menezes, Godfred Antony
    Shivappa, Pooja
    George, Biji Thomas
    Hossain, Ashfaque
    JOURNAL OF PHARMACEUTICAL RESEARCH INTERNATIONAL, 2021, 33 (17) : 68 - 78
  • [29] High performance of a novel antigen detection test on nasopharyngeal specimens for diagnosing SARS-CoV-2 infection
    Courtellemont, L.
    Guinard, J.
    Guillaume, C.
    Giache, S.
    Rzepecki, V.
    Seve, A.
    Gubavu, C.
    Baud, K.
    Le Helloco, C.
    Cassuto, G. N.
    Pialoux, G.
    Hocqueloux, L.
    Prazuck, T.
    JOURNAL OF MEDICAL VIROLOGY, 2021, 93 (05) : 3152 - 3157
  • [30] Diagnostic Efficacy of RealStar SARS-CoV-2 Reverse Transcription-Polymerase Chain Reaction (RT-PCR) in Comparison to GeneXpert System for the Detection of COVID-19
    Jawdat, Dunia M.
    Aljarallah, Gadah S.
    Albakr, Maha A.
    Alajlan, Reema M.
    Almesfir, Reem F.
    Alqubaibi, Nada F.
    Albalawi, Maram M.
    Alshehri, Ali A.
    Aljohani, Sameera M.
    CUREUS JOURNAL OF MEDICAL SCIENCE, 2023, 15 (02)