Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data

被引:0
|
作者
Robert C McLeay
Timothy L Bailey
机构
[1] The University of Queensland,Institute for Molecular Bioscience
来源
BMC Bioinformatics | / 11卷
关键词
Biological Signal; Association Function; Motif Discovery; Affinity Function; Association Score;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Coding for system-on-chip networks: A unified framework
    Sridhara, SR
    Shanbhag, NR
    IEEE TRANSACTIONS ON VERY LARGE SCALE INTEGRATION (VLSI) SYSTEMS, 2005, 13 (06) : 655 - 667
  • [22] Coding for system-on-chip networks: A unified framework
    Sridhara, SR
    Shanbhag, NR
    41ST DESIGN AUTOMATION CONFERENCE, PROCEEDINGS 2004, 2004, : 103 - 106
  • [23] ENSPART: An Ensemble Framework based on Data Partitioning for DNA Motif Analysis
    Lee, Nung Kion
    Choong, Allen Chieng Hoon
    Omar, Norshafrina
    2016 IEEE 16TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOENGINEERING (BIBE), 2016, : 87 - 94
  • [24] ChIPCodis: mining complex regulatory systems in yeast by concurrent enrichment analysis of chip-on-chip data
    Abascal, Federico
    Carmona-Saez, Pedro
    Carazo, Jose-Maria
    Pascual-Montano, Alberto
    BIOINFORMATICS, 2008, 24 (09) : 1208 - 1209
  • [25] RIP-chip enrichment analysis
    Erhard, Florian
    Doelken, Lars
    Zimmer, Ralf
    BIOINFORMATICS, 2013, 29 (01) : 77 - 83
  • [26] Discovering transcriptional modules from motif, chip-chip and microarray data
    De Bie, T
    Monsieurs, P
    Engelen, K
    De Moor, B
    Cristianini, N
    Marchal, K
    PACIFIC SYMPOSIUM ON BIOCOMPUTING 2005, 2005, : 483 - 494
  • [27] Inferring transcriptional modules from ChIP-chip, motif and microarray data
    Lemmens, Karen
    Dhollander, Thomas
    De Bie, Tijl
    Monsieurs, Pieter
    Engelen, Kristof
    Smets, Bart
    Winderickx, Joris
    De Moor, Bart
    Marchal, Kathleen
    GENOME BIOLOGY, 2006, 7 (05)
  • [28] Inferring transcriptional modules from ChIP-chip, motif and microarray data
    Karen Lemmens
    Thomas Dhollander
    Tijl De Bie
    Pieter Monsieurs
    Kristof Engelen
    Bart Smets
    Joris Winderickx
    Bart De Moor
    Kathleen Marchal
    Genome Biology, 7
  • [29] A unified framework for harmonic analysis of functions on directed graphs and changing data
    Mhaskar, H. N.
    APPLIED AND COMPUTATIONAL HARMONIC ANALYSIS, 2018, 44 (03) : 611 - 644
  • [30] A communication placement framework with unified dependence and data-flow analysis
    Kennedy, K
    Sethi, A
    3RD INTERNATIONAL CONFERENCE ON HIGH PERFORMANCE COMPUTING, PROCEEDINGS, 1996, : 201 - 208