Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling

被引:0
|
作者
Tracy M. Yamawaki
Daniel R. Lu
Daniel C. Ellwanger
Dev Bhatt
Paolo Manzanillo
Vanessa Arias
Hong Zhou
Oh Kyu Yoon
Oliver Homann
Songli Wang
Chi-Ming Li
机构
[1] Genome Analysis Unit,
[2] Amgen Research,undefined
[3] Oncology/Inflammation,undefined
[4] Amgen Research,undefined
来源
BMC Genomics | / 22卷
关键词
Single cell; Transcriptomics; Single-cell RNA-seq; High throughput sequencing; Immune-cell profiling;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Single-cell RNA-seq profiling of individual Biomphalaria glabrata immune cells with a focus on immunologically relevant transcripts
    Hongyu Li
    Abdullah A. Gharamah
    Jacob R. Hambrook
    Xinzhong Wu
    Patrick C. Hanington
    Immunogenetics, 2022, 74 : 77 - 98
  • [22] Single-cell RNA-Seq unveils tumor microenvironment
    Lee, Hae-Ock
    Park, Woong-Yang
    BMB REPORTS, 2017, 50 (06) : 283 - 284
  • [23] Emerging deep learning methods for single-cell RNA-seq data analysis
    Zheng, Jie
    Wang, Ke
    QUANTITATIVE BIOLOGY, 2019, 7 (04) : 247 - 254
  • [24] Single-cell RNA-seq profiling of individual Biomphalaria glabrata immune cells with a focus on immunologically relevant transcripts
    Li, Hongyu
    Gharamah, Abdullah A.
    Hambrook, Jacob R.
    Wu, Xinzhong
    Hanington, Patrick C.
    IMMUNOGENETICS, 2022, 74 (01) : 77 - 98
  • [25] Practical Compass of Single-Cell RNA-Seq Analysis
    Okada, Hiroyuki
    Chung, Ung-il
    Hojo, Hironori
    CURRENT OSTEOPOROSIS REPORTS, 2024, 22 (05) : 433 - 440
  • [26] Single-cell RNA-seq methods to interrogate virus-host interactions
    Ratnasiri, Kalani
    Wilk, Aaron J.
    Lee, Madeline J.
    Khatri, Purvesh
    Blish, Catherine A.
    SEMINARS IN IMMUNOPATHOLOGY, 2023, 45 (01) : 71 - 89
  • [27] Single-cell RNA-seq methods to interrogate virus-host interactions
    Kalani Ratnasiri
    Aaron J. Wilk
    Madeline J. Lee
    Purvesh Khatri
    Catherine A. Blish
    Seminars in Immunopathology, 2023, 45 : 71 - 89
  • [28] Single-cell RNA-seq data clustering: A survey with performance comparison study
    Li, Ruiyi
    Guan, Jihong
    Zhou, Shuigeng
    JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2020, 18 (04)
  • [29] Understanding the Adult Mammalian Heart at Single-Cell RNA-Seq Resolution
    Marin-Sedeno, Ernesto
    Martinez de Morentin, Xabier
    Perez-Pomares, Jose M.
    Gomez-Cabrero, David
    Ruiz-Villalba, Adrian
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [30] Molecular Profiling of Human Non-Small Cell Lung Cancer by Single-Cell RNA-Seq
    Wang, J.
    He, J.
    Tang, F. C.
    Li, Q. Q.
    Wang, R.
    Yang, Z. L.
    Li, W.
    Wang, Z. J.
    Bai, H.
    Wen, L.
    Tian, Y. H.
    Gao, Y. B.
    JOURNAL OF THORACIC ONCOLOGY, 2021, 16 (03) : S539 - S540