GOLEM: an interactive graph-based gene-ontology navigation and analysis tool

被引：0
作者：
Rachel SG Sealfon
Matthew A Hibbs
Curtis Huttenhower
Chad L Myers
Olga G Troyanskaya
机构：
[1] Princeton University,Department of Computer Science
[2] Princeton University,Lewis
来源：
BMC Bioinformatics | / 7卷
关键词：
Gene Ontology; Directed Acyclic Graph; Annotate Gene; Gene Ontology Term; Annotation File;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [31] BiNChE: A web tool and library for chemical enrichment analysis based on the ChEBI ontology
    Moreno, Pablo
    Beisken, Stephan
    Harsha, Bhavana
    Muthukrishnan, Venkatesh
    Tudose, Ilinca
    Dekker, Adriano
    Dornfeldt, Stefanie
    Taruttis, Franziska
    Grosse, Ivo
    Hastings, Janna
    Neumann, Steffen
    Steinbeck, Christoph
    [J]. BMC BIOINFORMATICS, 2015, 16
  • [32] An improved method for functional similarity analysis of genes based on Gene Ontology
    Tian, Zhen
    Wang, Chunyu
    Guo, Maozu
    Liu, Xiaoyan
    Teng, Zhixia
    [J]. BMC SYSTEMS BIOLOGY, 2016, 10
  • [33] DiVenn: An Interactive and Integrated Web-Based Visualization Tool for Comparing Gene Lists
    Sun, Liang
    Dong, Sufen
    Ge, Yinbing
    Fonseca, Jose Pedro
    Robinson, Zachary T.
    Mysore, Kirankumar S.
    Mehta, Perdeep
    [J]. FRONTIERS IN GENETICS, 2019, 10
  • [34] Pathway and gene ontology based analysis of gene expression in a rat model of cerebral ischemic tolerance
    Feng, Zhenq
    Davis, Daniel P.
    Sasik, Roman
    Patel, Hemal H.
    Drummond, John C.
    Patel, Piyush M.
    [J]. BRAIN RESEARCH, 2007, 1177 : 103 - 123
  • [35] NeVOmics: An Enrichment Tool for Gene Ontology and Functional Network Analysis and Visualization of Data from OMICs Technologies
    Zuniga-Leon, Eduardo
    Carrasco-Navarro, Ulises
    Fierro, Francisco
    [J]. GENES, 2018, 9 (12):
  • [36] iMTBGO: An Algorithm for Integrating Metabolic Networks with Transcriptomes Based on Gene Ontology Analysis
    Mao, Zhitao
    Ma, Hongwu
    [J]. CURRENT GENOMICS, 2019, 20 (04) : 252 - 259
  • [37] GS2PATH: A web-based integrated analysis tool for finding functional relationships using gene ontology and biochemical pathway data
    Yang, Jin Ok
    Park, Charny
    Lee, Byungwook
    Kim, Sangsoo
    Bhak, Jong
    Woo, Hyun Goo
    [J]. BIOINFORMATION, 2007, 2 (05) : 194 - 196
  • [38] Ontology based molecular signatures for immune cell types via gene expression analysis
    Terrence F Meehan
    Nicole A Vasilevsky
    Christopher J Mungall
    David S Dougall
    Melissa A Haendel
    Judith A Blake
    Alexander D Diehl
    [J]. BMC Bioinformatics, 14
  • [39] An integrated strategy for functional analysis of microbial communities based on gene ontology and 16S rRNA gene
    Deng, Su-Ping
    Huang, De-Shuang
    [J]. INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2015, 13 (01) : 63 - 74
  • [40] Tissue-specific functions based on information content of gene ontology using cap analysis gene expression
    Sami Maekawa
    Atsuko Matsumoto
    Yoichi Takenaka
    Hideo Matsuda
    [J]. Medical & Biological Engineering & Computing, 2007, 45 : 1029 - 1036
12345