Extensive translation of circular RNAs driven by N6-methyladenosine

被引:0
作者
Yun Yang
Xiaojuan Fan
Miaowei Mao
Xiaowei Song
Ping Wu
Yang Zhang
Yongfeng Jin
Yi Yang
Ling-Ling Chen
Yang Wang
Catherine CL Wong
Xinshu Xiao
Zefeng Wang
机构
[1] Institute of Biochemistry,Department of Integrative Biology and Physiology and the Molecular Biology Institute
[2] College of Life Sciences,Department of Pharmacology
[3] Zhejiang University at Zijingang,undefined
[4] Zhejiang,undefined
[5] CAS Key Lab for Computational Biology,undefined
[6] CAS Center for Excellence in Molecular Cell Science,undefined
[7] CAS-MPG Partner Institute for Computational Biology,undefined
[8] Shanghai Institute for Biological Sciences,undefined
[9] Chinese Academy of Sciences,undefined
[10] UCLA,undefined
[11] University of North Carolina at Chapel Hill,undefined
[12] Synthetic Biology and Biotechnology Laboratory,undefined
[13] State Key Laboratory of Bioreactor Engineering,undefined
[14] School of Pharmacy,undefined
[15] East China University of Science and Technology,undefined
[16] National Center for Protein Science,undefined
[17] Institute of Biochemistry and Cell Biology,undefined
[18] Shanghai Institutes for Biological Sciences,undefined
[19] Chinese Academy of Sciences,undefined
[20] Shanghai Science Research Center,undefined
[21] Chinese Academy of Sciences,undefined
[22] Institute of Biochemistry and Cell Biology,undefined
[23] Shanghai Institute for Biological Sciences,undefined
[24] Chinese Academy of Sciences,undefined
[25] Institute of Cancer Stem Cell,undefined
[26] Dalian Medical University,undefined
来源
Cell Research | 2017年 / 27卷
关键词
-methyladenosine; circular RNA; cap-independent translation; eIF4G2;
D O I
暂无
中图分类号
学科分类号
摘要
Extensive pre-mRNA back-splicing generates numerous circular RNAs (circRNAs) in human transcriptome. However, the biological functions of these circRNAs remain largely unclear. Here we report that N6-methyladenosine (m6A), the most abundant base modification of RNA, promotes efficient initiation of protein translation from circRNAs in human cells. We discover that consensus m6A motifs are enriched in circRNAs and a single m6A site is sufficient to drive translation initiation. This m6A-driven translation requires initiation factor eIF4G2 and m6A reader YTHDF3, and is enhanced by methyltransferase METTL3/14, inhibited by demethylase FTO, and upregulated upon heat shock. Further analyses through polysome profiling, computational prediction and mass spectrometry reveal that m6A-driven translation of circRNAs is widespread, with hundreds of endogenous circRNAs having translation potential. Our study expands the coding landscape of human transcriptome, and suggests a role of circRNA-derived proteins in cellular responses to environmental stress.
引用
收藏
页码:626 / 641
页数:15
相关论文
共 50 条
[31]   WTAP-mediated N6-methyladenosine modification of NLRP3 mRNA in kidney injury of diabetic nephropathy [J].
Jianzi Lan ;
Bowen Xu ;
Xin Shi ;
Qi Pan ;
Qing Tao .
Cellular & Molecular Biology Letters, 2022, 27
[32]   Identification and Characterization of N6-Methyladenosine CircRNAs and Methyltransferases in the Lens Epithelium Cells From Age-Related Cataract [J].
Li, Pengfei ;
Yu, Hualin ;
Zhang, Guowei ;
Kang, Lihua ;
Qin, Bai ;
Cao, Yu ;
Luo, Jiawei ;
Chen, Xiaojuan ;
Wang, Ying ;
Qin, Miaomiao ;
Wu, Jian ;
Huang, Yemeng ;
Zou, Xi ;
Guan, Huaijin ;
Wang, Yong .
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2020, 61 (10)
[33]   Translation and functional roles of circular RNAs in human cancer [J].
Lei, Ming ;
Zheng, Guantao ;
Ning, Qianqian ;
Zheng, Junnian ;
Dong, Dong .
MOLECULAR CANCER, 2020, 19 (01)
[34]   Translation and functional roles of circular RNAs in human cancer [J].
Ming Lei ;
Guantao Zheng ;
Qianqian Ning ;
Junnian Zheng ;
Dong Dong .
Molecular Cancer, 19
[35]   RNA N6-methyladenosine modification mediates downregulation of NR4A1 to facilitate malignancy of cervical cancer [J].
Tao Yu ;
Fuxia Wu ;
Yan Jia ;
Xue Zhang ;
Xiaozhen Qi ;
Zeyuan Jin ;
Tongxin Hao ;
Jianing Zhao ;
Ziyu Liu ;
Chaokun Wang ;
Minmin Niu ;
Qin Yue ;
Min Li ;
Yankun Liu .
Cell & Bioscience, 12
[36]   Structured elements drive extensive circular RNA translation [J].
Chen, Chun-Kan ;
Cheng, Ran ;
Demeter, Janos ;
Chen, Jin ;
Weingarten-Gabbay, Shira ;
Jiang, Lihua ;
Snyder, Michael P. ;
Weissman, Jonathan S. ;
Segal, Eran ;
Jackson, Peter K. ;
Chang, Howard Y. .
MOLECULAR CELL, 2021, 81 (20) :4300-+
[37]   N6-methyladenosine modification of circular RNA circ-ARL3 facilitates Hepatitis B virus-associated hepatocellular carcinoma via sponging miR-1305 [J].
Rao, Xi ;
Lai, Lingling ;
Li, Xiaopeng ;
Wang, Liang ;
Li, Ai ;
Yang, Qian .
IUBMB LIFE, 2021, 73 (02) :408-417
[38]   Dm6A-TSVM: detection of N6-methyladenosine (m6A) sites from RNA transcriptomes using the twin support vector machines [J].
Zhaoyang Liu ;
Kun Fu ;
Hongsheng Yin ;
Kaijian Xia ;
Yuteng Xiao ;
Honglei Wang ;
Gangshen Li .
Journal of Ambient Intelligence and Humanized Computing, 2023, 14 :5499-5505
[39]   Electrochemical competitive immunodetection of messenger RNA modified with N6-methyladenosine by using DNA-modified mesoporous PtCo nanospheres [J].
Xinying Ou ;
Qinli Pu ;
Shangchun Sheng ;
Tao Dai ;
Dan Gou ;
Wen Yu ;
Tingyan Yang ;
Ling Dai ;
Yujun Yang ;
Guoming Xie .
Microchimica Acta, 2020, 187
[40]   N6-methyladenosine modification of CENPK mRNA by ZC3H13 promotes cervical cancer stemness and chemoresistance [J].
Xian Lin ;
Feng Wang ;
Jian Chen ;
Jing Liu ;
Yi-Bin Lin ;
Li Li ;
Chuan-Ben Chen ;
Qin Xu .
Military Medical Research, 9