Use of designed sequences in protein structure recognition

被引:0
|
作者
Gayatri Kumar
Richa Mudgal
Narayanaswamy Srinivasan
Sankaran Sandhya
机构
[1] Lab 103,
[2] Molecular Biophysics Unit,undefined
[3] Indian Institute of Science,undefined
[4] Present address: Institute for Research in Biomedicine (IRB),undefined
[5] Parc Cientific de Barcelona,undefined
来源
关键词
Structure recognition; Fold-assignment; Sequence-structure gap; Structural domain assignment; Function annotation; Homology detection;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] The role of DNA structure and dynamics in the recognition of BPV-1-E2 protein target sequences
    不详
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2005, 34 (06): : 735 - 735
  • [22] The role of DNA structure and dynamics in the recognition of bovine papillomaviruis E2 protein target sequences
    Djuranovic, D
    Oguey, C
    Hartmann, B
    JOURNAL OF MOLECULAR BIOLOGY, 2004, 339 (04) : 785 - 796
  • [23] Understanding the Role of Chain Flexibility in Amyloid Protein Aggregation through Rationally Designed Protein Sequences
    Vance, Steven Z.
    Redmon, Xavier
    Hall, Rachel
    Moore, Colman
    Booth, Gram
    Hestekin, Christa
    Moss, Melissa
    BIOPHYSICAL JOURNAL, 2017, 112 (03) : 52A - 52A
  • [24] THE STRUCTURE OF PROTEIN-PROTEIN RECOGNITION SITES
    JANIN, J
    CHOTHIA, C
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1990, 265 (27) : 16027 - 16030
  • [25] Artificial protein sequences enable recognition of vicinal and distant protein functional relationships
    Kumar, Gayatri
    Srinivasan, Narayanaswamy
    Sandhya, Sankaran
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2020, 88 (12) : 1688 - 1700
  • [26] OLIGOPEPTIDE BIASES IN PROTEIN SEQUENCES AND THEIR USE IN PREDICTING PROTEIN CODING REGIONS IN NUCLEOTIDE-SEQUENCES
    MCCALDON, P
    ARGOS, P
    PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1988, 4 (02): : 99 - 122
  • [27] Protein topology recognition from secondary structure sequences: Application of the hidden Markov models to the alpha class proteins
    DiFrancesco, V
    Garnier, J
    Munson, PJ
    JOURNAL OF MOLECULAR BIOLOGY, 1997, 267 (02) : 446 - 463
  • [28] Aligning Protein Sequences with Predicted Secondary Structure
    Kececioglu, John
    Kim, Eagu
    Wheeler, Travis
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2010, 17 (03) : 561 - 580
  • [29] Predicting protein structure from single sequences
    Yang Shen
    Nature Computational Science, 2022, 2 : 775 - 776
  • [30] Predicting protein structure from single sequences
    Shen, Yang
    NATURE COMPUTATIONAL SCIENCE, 2022, 2 (12): : 775 - 776