Identification of SNP and SSR markers in eggplant using RAD tag sequencing

被引:0
|
作者
Lorenzo Barchi
Sergio Lanteri
Ezio Portis
Alberto Acquadro
Giampiero Valè
Laura Toppino
Giuseppe Leonardo Rotino
机构
[1] University of Torino,DIVAPRA Plant Genetics and Breeding
[2] CRA-ORL Research Unit for Vegetable Crops,undefined
[3] CRA-GPG Genomic Research Centre,undefined
来源
BMC Genomics | / 12卷
关键词
Mapping Parent; GoldenGate Assay; Globe Artichoke; Restriction Enzyme Recognition Site; Indel Frequency;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Identification of SNP and SSR markers in eggplant using RAD tag sequencing
    Barchi, Lorenzo
    Lanteri, Sergio
    Portis, Ezio
    Acquadro, Alberto
    Vale, Giampiero
    Toppino, Laura
    Rotino, Giuseppe Leonardo
    BMC GENOMICS, 2011, 12
  • [2] RAD tag sequencing as a source of SNP markers in Cynara cardunculus L
    Scaglione, Davide
    Acquadro, Alberto
    Portis, Ezio
    Tirone, Matteo
    Knapp, Steven J.
    Lanteri, Sergio
    BMC GENOMICS, 2012, 13
  • [3] RAD tag sequencing as a source of SNP markers in Cynara cardunculus L
    Davide Scaglione
    Alberto Acquadro
    Ezio Portis
    Matteo Tirone
    Steven J Knapp
    Sergio Lanteri
    BMC Genomics, 13
  • [4] Identification of Laying-Related SNP Markers in Geese Using RAD Sequencing
    Yu, ShiGang
    Chu, WeiWei
    Zhang, LiFan
    Han, HouMing
    Zhao, RongXue
    Wu, Wei
    Zhu, JiangNing
    Dodson, Michael V.
    Wei, Wei
    Liu, HongLin
    Chen, Jie
    PLOS ONE, 2015, 10 (07):
  • [5] Identification of SNP and SSR Markers in Finger Millet Using Next Generation Sequencing Technologies
    Gimode, Davis
    Odeny, Damaris A.
    de Villiers, Etienne P.
    Wanyonyi, Solomon
    Dida, Mathews M.
    Mneney, Emmarold E.
    Muchugi, Alice
    Machuka, Jesse
    de Villiers, Santie M.
    PLOS ONE, 2016, 11 (07):
  • [6] Identification of SNP markers for inferring phylogeny in temperate bamboos (Poaceae: Bambusoideae) using RAD sequencing
    Wang, X. Q.
    Zhao, L.
    Eaton, D. A. R.
    Li, D. Z.
    Guo, Z. H.
    MOLECULAR ECOLOGY RESOURCES, 2013, 13 (05) : 938 - 945
  • [7] dd-RAD-based Identification of SNP and Comparative Association Analysis Using SNP and Genic-SSR Markers in Brassica juncea
    Sudan, J.
    Singh, R.
    Sharma, S.
    Salgotra, R. K.
    Gupta, S. K.
    Sharma, S.
    IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL, 2018, 54 : S28 - S28
  • [8] Development of SSR markers identification system for Carex L. based on RAD sequencing
    Cui, Rongfeng
    Wei, Bo
    Liang, Fang
    Li, Zijing
    Dong, Aixiang
    Zhou, Yan
    Naizhe, Ji
    Liu, Dongyun
    Wang, Qing
    Fu, Fang
    Sun, Liping
    Qin, Helan
    Yuan, Chao
    Song, Lina
    Wang, Tao
    Wang, Qian
    Shan, Jin
    PHYTOTAXA, 2023, 626 (03) : 170 - 180
  • [9] IDENTIFICATION OF SPECIES-SPECIFIC SNP MARKERS IN TILAPIAS USING DOUBLE-DIGEST RAD SEQUENCING (ddRADseq)
    Syaifudin, M.
    Bekaert, M. B.
    Taggart, J. B.
    Hulata, G.
    D'Cotta, H.
    Baroiller, J. F.
    Penman, D. J.
    McAndrew, B. J.
    AQUACULTURE, 2017, 472 : 94 - 94
  • [10] Identification and characterization of SSR markers in taro [Colocasia esculenta (L.) Schott] by RAD sequencing
    Weiqing Dong
    Fanglian He
    Shaolong Wei
    Zuyang Qiu
    Qi Chen
    Genetic Resources and Crop Evolution, 2021, 68 : 2897 - 2905