Measurement of carbonyl chemical shifts of excited protein states by relaxation dispersion NMR spectroscopy: comparison between uniformly and selectively 13C labeled samples

被引:0
|
作者
Patrik Lundström
D. Flemming Hansen
Lewis E. Kay
机构
[1] The University of Toronto,Department of Medical Genetics
[2] The University of Toronto,Department of Biochemistry
[3] The University of Toronto,Department of Chemistry
来源
关键词
Relaxation dispersion NMR; Chemical exchange; Carr–Purcell–Meiboom–Gill; Excited protein states; Chemical shifts;
D O I
暂无
中图分类号
学科分类号
摘要
Carr–Purcell–Meiboom–Gill (CPMG) relaxation dispersion nuclear magnetic resonance (NMR) spectroscopy has emerged as a powerful method for quantifying chemical shifts of excited protein states. For many applications of the technique that involve the measurement of relaxation rates of carbon magnetization it is necessary to prepare samples with isolated 13C spins so that experiments do not suffer from magnetization transfer between coupled carbon spins that would otherwise occur during the CPMG pulse train. In the case of 13CO experiments however the large separation between 13CO and 13Cα chemical shifts offers hope that robust 13CO dispersion profiles can be recorded on uniformly 13C labeled samples, leading to the extraction of accurate 13CO chemical shifts of the invisible, excited state. Here we compare such chemical shifts recorded on samples that are selectively labeled, prepared using [1-13C]-pyruvate and NaH13CO3, or uniformly labeled, generated from 13C-glucose. Very similar 13CO chemical shifts are obtained from analysis of CPMG experiments recorded on both samples, and comparison with chemical shifts measured using a second approach establishes that the shifts measured from relaxation dispersion are very accurate.
引用
收藏
相关论文
共 27 条
  • [1] Measurement of carbonyl chemical shifts of excited protein states by relaxation dispersion NMR spectroscopy:: comparison between uniformly and selectively 13C labeled samples
    Lundstroem, Patrik
    Hansen, D. Flemming
    Kay, Lewis E.
    JOURNAL OF BIOMOLECULAR NMR, 2008, 42 (01) : 35 - 47
  • [2] Measuring 13Cβ chemical shifts of invisible excited states in proteins by relaxation dispersion NMR spectroscopy
    Patrik Lundström
    Hong Lin
    Lewis E. Kay
    Journal of Biomolecular NMR, 2009, 44 : 139 - 155
  • [3] Measuring 13Cβ chemical shifts of invisible excited states in proteins by relaxation dispersion NMR spectroscopy
    Lundstrom, Patrik
    Lin, Hong
    Kay, Lewis E.
    JOURNAL OF BIOMOLECULAR NMR, 2009, 44 (03) : 139 - 155
  • [4] Accurate Measurement of Alpha Proton Chemical Shifts of Excited Protein States by Relaxation Dispersion NMR Spectroscopy
    Lundstroem, Patrik
    Hansen, D. Flemming
    Vallurupalli, Pramodh
    Kay, Lewis E.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2009, 131 (05) : 1915 - 1926
  • [5] Accurate measurement of alpha proton chemical shifts of excited protein states by relaxation dispersion NMR spectroscopy
    Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada
    J. Am. Chem. Soc., 2009, 5 (1915-1926):
  • [6] CPMG relaxation dispersion NMR experiments measuring glycine 1Hα and 13Cα chemical shifts in the 'invisible' excited states of proteins
    Vallurupalli, Pramodh
    Hansen, D. Flemming
    Lundstroem, Patrik
    Kay, Lewis E.
    JOURNAL OF BIOMOLECULAR NMR, 2009, 45 (1-2) : 45 - 55
  • [7] CPMG relaxation dispersion NMR experiments measuring glycine 1Hα and 13Cα chemical shifts in the ‘invisible’ excited states of proteins
    Pramodh Vallurupalli
    D. Flemming Hansen
    Patrik Lundström
    Lewis E. Kay
    Journal of Biomolecular NMR, 2009, 45 : 45 - 55
  • [8] Quantitative measurement of exchange dynamics in proteins via 13C relaxation dispersion of 13CHD2-labeled samples
    Enrico Rennella
    Anne K. Schuetz
    Lewis E. Kay
    Journal of Biomolecular NMR, 2016, 65 : 59 - 64
  • [9] Quantitative measurement of exchange dynamics in proteins via 13C relaxation dispersion of 13CHD2-labeled samples
    Rennella, Enrico
    Schuetz, Anne K.
    Kay, Lewis E.
    JOURNAL OF BIOMOLECULAR NMR, 2016, 65 (02) : 59 - 64
  • [10] CORRELATION OF C-13 AND N-15 CHEMICAL-SHIFTS IN SELECTIVELY AND UNIFORMLY LABELED PROTEINS BY HETERONUCLEAR TWO-DIMENSIONAL NMR-SPECTROSCOPY
    WESTLER, WM
    STOCKMAN, BJ
    MARKLEY, JL
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (18) : 6256 - 6258