ElemCor: accurate data analysis and enrichment calculation for high-resolution LC-MS stable isotope labeling experiments

被引：0

作者：

Di Du

Lin Tan

Yumeng Wang

Bo Peng

John N. Weinstein

Fredric E. Wondisford

Xiaoyang Su

Philip L. Lorenzi

机构：

[1] The University of Texas MD Anderson Cancer Center,Department of Bioinformatics and Computational Biology

[2] Robert Wood Johnson Medical School,Department of Medicine, Division of Endocrinology

[3] Rutgers University,undefined

[4] Cancer Institute of New Jersey,undefined

[5] Rutgers University,undefined

来源：

BMC Bioinformatics | / 20卷

关键词：

LC-MS; Stable isotope labeling; High resolution; Data correction;

D O I：

暂无

中图分类号：

学科分类号：

摘要：

引用

共 31 条

[21] Medicinally Used Asarum Species: High-Resolution LC-MS Analysis of Aristolochic Acid Analogs and In vitro Toxicity Screening in HK-2 Cells [J].

Michl, Johanna ;

Bello, Olusheyi ;

Kite, Geoffrey C. ;

Simmonds, Monique S. J. ;

Heinrich, Michael .

FRONTIERS IN PHARMACOLOGY, 2017, 8

[22] Effects of sample injection amount and time-of-flight mass spectrometric detection dynamic range on metabolome analysis by high-performance chemical isotope labeling LC-MS [J].

Zhou, Ruokun ;

Li, Liang .

JOURNAL OF PROTEOMICS, 2015, 118 :130-139

[23] Applications of chromatography-ultra high-resolution MS for stable isotope-resolved metabolomics (SIRM) reconstruction of metabolic networks [J].

Sun, Qiushi ;

Fan, Teresa W-M ;

Lane, Andrew N. ;

Higashi, Richard M. .

TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 2020, 123

[24] LC-quadrupole/Orbitrap high-resolution mass spectrometry enables stable isotope-resolved simultaneous quantification and 13C-isotopic labeling of acyl-coenzyme A thioesters [J].

Frey, Alexander J. ;

Feldman, Daniel R. ;

Trefely, Sophie ;

Worth, Andrew J. ;

Basu, Sankha S. ;

Snyder, Nathaniel W. .

ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2016, 408 (13) :3651-3658

[25] LC-quadrupole/Orbitrap high-resolution mass spectrometry enables stable isotope-resolved simultaneous quantification and 13C-isotopic labeling of acyl-coenzyme A thioesters [J].

Alexander J. Frey ;

Daniel R. Feldman ;

Sophie Trefely ;

Andrew J. Worth ;

Sankha S. Basu ;

Nathaniel W. Snyder .

Analytical and Bioanalytical Chemistry, 2016, 408 :3651-3658

[26] Evaluation of a Stable Isotope-Based Direct Quantification Method for Dicamba Analysis from Air and Water Using Single-Quadrupole LC-MS [J].

Ghaste, Manoj ;

Hayden, Nicholas C. ;

Osterholt, Matthew J. ;

Young, Julie ;

Young, Bryan ;

Widhalm, Joshua R. .

MOLECULES, 2020, 25 (16)

[27] Characterization of the isomeric configuration and impurities of (Z)-endoxifen by 2D NMR, high resolution LC-MS, and quantitative HPLC analysis [J].

Elkins, Phyllis ;

Coleman, Donna ;

Burgess, Jason ;

Gardner, Michael ;

Hines, John ;

Scott, Brendan ;

Kroenke, Michelle ;

Larson, Jami ;

Lightner, Melissa ;

Turner, Gregory ;

White, Jonathan ;

Liu, Paul .

JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS, 2014, 88 :174-179

[28] An algorithm for thorough background subtraction from high-resolution LC/MS data: application for detection of glutathione-trapped reactive metabolites [J].

Zhang, Haiying ;

Yang, Yanou .

JOURNAL OF MASS SPECTROMETRY, 2008, 43 (09) :1181-1190

[29] An algorithm for thorough background subtraction from high-resolution LC/MS data: application to the detection of troglitazone metabolites in rat plasma, bile, and urine [J].

Zhang, Haiying ;

Ma, Li ;

He, Kan ;

Zhu, Mingshe .

JOURNAL OF MASS SPECTROMETRY, 2008, 43 (09) :1191-1200

[30] High-resolution LC/MS for analysis of minor components in complex mixtures: negative ion ESI for identification of impurities and degradation products of a novel oligosaccharide antibiotic [J].

Shipkova, PA ;

Heimark, L ;

Bartner, PL ;

Chen, GD ;

Pramanik, BN ;

Ganguly, AK ;

Cody, RB ;

Kusai, A .

JOURNAL OF MASS SPECTROMETRY, 2000, 35 (11) :1252-1258

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