Poseidonocella pacifica gen. nov., sp. nov. and Poseidonocella sedimentorum sp. nov., novel alphaproteobacteria from the shallow sandy sediments of the Sea of Japan

被引:0
作者
Lyudmila A. Romanenko
Naoto Tanaka
Vasily I. Svetashev
Nataliya I. Kalinovskaya
机构
[1] Pacific Institute of Bioorganic Chemistry,NODAI Culture Collection Center
[2] Far-Eastern Branch,undefined
[3] Russian Academy of Sciences,undefined
[4] Tokyo University of Agriculture,undefined
[5] Institute of Marine Biology,undefined
[6] Far-Eastern Branch,undefined
[7] Russian Academy of Sciences,undefined
来源
Archives of Microbiology | 2012年 / 194卷
关键词
Class ; gen. nov.; sp. nov.; sp. nov.; Phenotype; Phylogeny; Marine sediments;
D O I
暂无
中图分类号
学科分类号
摘要
The taxonomic study of two Gram-negative, aerobic, non-pigmented bacteria KMM 9010T and KMM 9023T isolated from a sandy sediment sample collected from the Sea of Japan seashore was performed. On the basis of the nearly complete 16S rRNA gene sequences, strains KMM 9010T and KMM 9023T clustered with the Roseobacter lineage (class Alphaproteobacteria) forming a distinct phylogenetic line adjacent to the genus Donghicola. Novel strains shared the highest sequence similarity of 96.4% to each other and lower than 96.1% similarities to other validly named genera of the class Alphaproteobacteria. In both strains, ubiquinone Q-10 was found to be the major respiratory quinone; phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidic acid, and an unknown aminolipid were the major polar lipids and C18:1ω7c and 11-methyl C18:1ω7c were predominant fatty acids. The DNA G+C content was 60.5 mol% (KMM 9010T) and 65.4 mol% (KMM 9023T). Based on phenotypic properties and phylogenetic evidence, strains KMM 9010T and KMM 9023T should be classified as two novel species in a new genus, Poseidonocella gen. nov., with Poseidonocella pacifica sp. nov., the type species with the type strain KMM 9010T (= NRIC 0794T = JCM 17310T), and Poseidonocella sedimentorum sp. nov. as the second species with the type strain KMM 9023T (= NRIC 0796T = JCM 17311T).
引用
收藏
页码:113 / 121
页数:8
相关论文
共 157 条
[1]  
Brinkhoff T(2008)Diversity, ecology, and genomics of the Arch Microbiol 189 531-539
[2]  
Giebel H-A(2001) clade: a short overview Int J Syst Evol Microbiol 51 1997-2006
[3]  
Simon M(2005) gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North sea intertidal sediment Appl Environ Microbiol 71 5665-5677
[4]  
Bruns A(2006)Overview of the marine Int J Syst Evol Microbiol 56 2799-2803
[5]  
Rohde M(1984) lineage Arch Microbiol 137 247-249
[6]  
Berthe-Corti L(2006) gen. nov., sp. nov., a member of the Int J Syst Evol Microbiol 56 529-533
[7]  
Buchan A(1989) clade isolated from a solar saltern Cladistics 5 164-166
[8]  
Gonzalez JM(1957)Fatty acid, menaquinone and polar lipid composition of J Biol Chem 226 497-509
[9]  
Moran MA(2003) gen. nov., sp. nov., a novel member of the Int J Syst Evol Microbiol 53 1261-1269
[10]  
Choi DH(1980) clade from coastal sediment of the East China Sea J Mol Evol 16 111-120