Bacillus coreaensis sp. nov.: a xylan-hydrolyzing bacterium isolated from the soil of Jeju Island, Republic of Korea

被引:0
作者
Won-Jae Chi
Young Sang Youn
Jae-Seon Park
Soon-Kwang Hong
机构
[1] Myongji University,Department of Biological Science and Bioinformatics
[2] National Institute of Biological Resource,Biological and Genetic Resource Assessment Division
来源
Journal of Microbiology | 2015年 / 53卷
关键词
xylanase; DSM25506; KCTC-13895;
D O I
暂无
中图分类号
学科分类号
摘要
A xylan-degrading bacterium, designated as MS5T strain, was isolated from soil collected from the Jeju Island, Republic of Korea. Strain MS5T was Gram-stain-positive, aerobic, and motile by polar flagellum. The major fatty acids identified in this bacterium were iso-C15:0 (32.3%), C16:0 (27.3%), and anteiso-C15:0 (10.2%). A similarity search based on the 16S rRNA gene sequence revealed that the strain belongs to the class Bacilli and shared the highest similarity with the type strains Bacillus beringensis BR035T (98.7%) and Bacillus korlensis ZLC-26T (98.6%) which form a coherent cluster in a neighbor-joining phylogenetic tree. The DNA G+C content of strain MS5T was 43.0 mol%. The major menaquinone was MK-7 and the diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. The DNADNA relatedness values between strain MS5T and two closely related species, B. beringensis BR035T and B. korlensis ZLC-26T, were less than 70%. DNA-DNA relatedness analysis and 16S rRNA sequence similarity, as well as phenotypic and chemotaxonomic characteristics suggest that the strain MS5T constitutes a novel Bacillus species, for which the name Bacillus coreaensis sp. nov. is proposed. The type strain is MS5T (=DSM25506T =KCTC13895T).
引用
收藏
页码:448 / 453
页数:5
相关论文
共 74 条
  • [1] Baker G.C.(2003)Review and reanalysis of domain-specific 16S primers J. Microbiol. Methods 55 541-555
  • [2] Smith J.J.(2012)A novel alkaliphilic xylanase from the newly isolated mesophilic Appl. Biochem. Biotechnol. 168 899-909
  • [3] Cowan D.A.(2007) sp. MX47: production, purification, and characterization Int J. Syst. Evol. Microbiol. 57 2259-2261
  • [4] Chi W.J.(1986)ExTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences Bergey’s Manual of Systematic Bacteriology 2 1105-1139
  • [5] Park D.Y.(1872)Genus Beitrage zur Biologie der Pflanzen 1 127-224
  • [6] Chang Y.K.(2005) Cohn 1872 FEMS Microbiol. Rev. 29 3-23
  • [7] Hong S.K.(1989)Untersuchungen über Bakterien Int. J. Syst. Bacteriol. 39 224-229
  • [8] Chun J.(1999)Xylanases, xylanase families and extremophilic xylanases Nucleic Acids Symp. Ser. 41 95-98
  • [9] Lee J.H.(2014)Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains J. Microbiol. 52 554-558
  • [10] Jung Y.Y.(1987)BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Methods Microbiol. 19 161-207