A novel method for drug-target interaction prediction based on graph transformers model

被引:0
|
作者
Hongmei Wang
Fang Guo
Mengyan Du
Guishen Wang
Chen Cao
机构
[1] Changchun University of Technology,College of Computer Science and Engineering
[2] Nanjing Medical University,School of Biomedical Engineering and Informatics
[3] University of Calgary,Department of Biochemistry and Molecular Biology, Alberta Children’s Hospital Research Institute
来源
BMC Bioinformatics | / 23卷
关键词
Drug-target interaction; Graph attention network; Line graph;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Multitype Perception Method for Drug-Target Interaction Prediction
    Wang, Huan
    Liu, Ruigang
    Wang, Baijing
    Hong, Yifan
    Cui, Ziwen
    Ni, Qiufen
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 20 (06) : 3489 - 3498
  • [22] Drug-target interaction prediction based on spatial consistency constraint and graph convolutional autoencoder
    Peng Chen
    Haoran Zheng
    BMC Bioinformatics, 24
  • [23] A unified drug-target interaction prediction framework based on knowledge graph and recommendation system
    Ye, Qing
    Hsieh, Chang-Yu
    Yang, Ziyi
    Kang, Yu
    Chen, Jiming
    Cao, Dongsheng
    He, Shibo
    Hou, Tingjun
    NATURE COMMUNICATIONS, 2021, 12 (01)
  • [24] GSRF-DTI: a framework for drug-target interaction prediction based on a drug-target pair network and representation learning on a large graph
    Zhu, Yongdi
    Ning, Chunhui
    Zhang, Naiqian
    Wang, Mingyi
    Zhang, Yusen
    BMC BIOLOGY, 2024, 22 (01)
  • [25] Drug-target interaction prediction based on spatial consistency constraint and graph convolutional autoencoder
    Chen, Peng
    Zheng, Haoran
    BMC BIOINFORMATICS, 2023, 24 (01)
  • [26] DeepNC: a framework for drug-target interaction prediction with graph neural networks
    Tran, Huu Ngoc Tran
    Thomas, J. Joshua
    Malim, Nurul Hashimah Ahamed Hassain
    PEERJ, 2022, 10
  • [27] Drug-target Interaction Prediction By Combining Transformer and Graph Neural Networks
    Liu, Junkai
    Lu, Yaoyao
    Guan, Shixuan
    Jiang, Tengsheng
    Ding, Yijie
    Fu, Qiming
    Cui, Zhiming
    Wu, Hongjie
    CURRENT BIOINFORMATICS, 2024, 19 (04) : 316 - 326
  • [28] HiGraphDTI: Hierarchical Graph Representation Learning for Drug-Target Interaction Prediction
    Liu, Bin
    Wu, Siqi
    Wang, Jin
    Deng, Xin
    Zhou, Ao
    MACHINE LEARNING AND KNOWLEDGE DISCOVERY IN DATABASES-RESEARCH TRACK, PT VI, ECML PKDD 2024, 2024, 14946 : 354 - 370
  • [29] Drug-Target Interaction Prediction Based on Heterogeneous Networks
    Wang, Yingjie
    Chang, Huiyou
    Wang, Jihong
    Shi, Yue
    2018 2ND INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND BIOINFORMATICS (ICBEB 2018), 2018, : 14 - 18
  • [30] MINDG: A Drug-Target Interaction Prediction Method Based on an Integrated Learning Algorithm
    Yang, Hailong
    Chen, Yue
    Zuo, Yun
    Deng, Zhaohong
    Pan, Xiaoyong
    Shen, Hong-Bin
    Choi, Kup-Sze
    Yu, Dong-Jun
    BIOINFORMATICS, 2024, 40 (04)