Inversion-based genomic signatures

被引:0
作者
Krister M Swenson
Bernard ME Moret
机构
[1] Laboratory for Computational Biology and Bioinformatics,
[2] EPFL (Swiss Federal Institute of Technology),undefined
来源
BMC Bioinformatics | / 10卷
关键词
Maximum Signature; Steiner Point; Greedy Heuristic; Genomic Signature; Signature Graph;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 42 条
[1]  
Pearson W(1988)Improved Tools for Biological Sequence Comparison Proc Natl Acad Sci USA 85 2444-2448
[2]  
Lipman D(1990)Basic local alignment search tool J Mol Biol 215 403-410
[3]  
Altschul S(1995)Dinucleotide relative abundance extremes: a genomic signature Trends Genet 11 283-290
[4]  
Gish W(1999)Genome signature comparisons among prokaryote, plasmid, and mitochondrial DNA Proc Natl Acad Sci USA 96 9184-9189
[5]  
Miller W(2005)Tetrahydrogestrinone induces a genomic signature typical of a potent anabolic steroid J Endocrinol 184 427-433
[6]  
Myers E(2008)Validating the genomic signature of pediatric septic shock Physiological Genomics 34 127-134
[7]  
Lipman D(2000)An archeal genomic signature Proc Natl Acad Sci USA 97 3304-3308
[8]  
Karlin S(2007)Paired-end genomic signature tags: a method for the functional analysis of genomes and epigenomes Genet Eng (NY) 28 159-173
[9]  
Burge C(2006)The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction Genome Research 16 311-313
[10]  
Campbell A(2002)Genome-scale evolution: reconstructing gene orders in the ancestral species Genome Research 12 26-36