Gene identification and transcriptome analysis of low cadmium accumulation rice mutant (lcd1) in response to cadmium stress using MutMap and RNA-seq

被引：0
|
作者：
Zhen Zhen Cao
Xiao Yan Lin
Yong Jie Yang
Mei Yan Guan
Ping Xu
Ming Xue Chen
机构：
[1] China National Rice Research Institute,Rice Product Quality Supervision and Inspection Center
来源：
BMC Plant Biology | / 19卷
关键词：
Rice (; L.); Cadmium; MutMap; RNA-seq; SNP; Transcriptome analysis;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 21 条
  • [1] Gene identification and transcriptome analysis of low cadmium accumulation rice mutant (lcd1) in response to cadmium stress using MutMap and RNA-seq
    Cao, Zhen Zhen
    Lin, Xiao Yan
    Yang, Yong Jie
    Guan, Mei Yan
    Xu, Ping
    Chen, Ming Xue
    BMC PLANT BIOLOGY, 2019, 19 (1)
  • [2] Transcriptome-Wide Identification of miRNAs and Their Targets from Typha angustifolia by RNA-Seq and Their Response to Cadmium Stress
    Xu, Yingchun
    Chu, Lingling
    Jin, Qijiang
    Wang, Yanjie
    Chen, Xian
    Zhao, Hui
    Xue, Zeyun
    PLOS ONE, 2015, 10 (04):
  • [3] RNA-Seq Analysis of Rice Roots Reveals the Involvement of Post-Transcriptional Regulation in Response to Cadmium Stress
    He, Fei
    Liu, Qingquan
    Zheng, Li
    Cui, Yaqiong
    Shen, Zhenguo
    Zheng, Luqing
    FRONTIERS IN PLANT SCIENCE, 2015, 6
  • [4] A transcriptomic (RNA-seq) analysis of genes responsive to both cadmium and arsenic stress in rice root
    Huang, Yingmei
    Chen, Huiqiong
    Reinfelder, John R.
    Liang, Xiaoyu
    Sun, Chongjun
    Liu, Chuanping
    Li, Fangbai
    Yi, Jicai
    SCIENCE OF THE TOTAL ENVIRONMENT, 2019, 666 : 445 - 460
  • [5] Transcriptome analysis of cadmium accumulation characteristics and fruit response to cadmium stress in Zunla 1 chili pepper
    Zhu, Xinyu
    Tian, Haowen
    Li, Xueer
    Yan, Hongyan
    Yang, Sanwei
    He, Guandi
    COGENT FOOD & AGRICULTURE, 2024, 10 (01):
  • [6] Full-Length Transcriptome Assembly of Italian Ryegrass Root Integrated with RNA-Seq to Identify Genes in Response to Plant Cadmium Stress
    Hu, Zhaoyang
    Zhang, Yufei
    He, Yue
    Cao, Qingqing
    Zhang, Ting
    Lou, Laiqing
    Cai, Qingsheng
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (03)
  • [7] Transcriptome analysis of rice-seedling roots under soil–salt stress using RNA-Seq method
    Anil Kumar Nalini Chandran
    Jeong-Won Kim
    Yo-Han Yoo
    Hye Lin Park
    Yeon-Ju Kim
    Man-Ho Cho
    Ki-Hong Jung
    Plant Biotechnology Reports, 2019, 13 : 567 - 578
  • [8] Identification of Salt Stress Response Genes in Rosa chinensis Leaves by Comparative RNA-seq Analysis of Transcriptome Dynamics
    Tian, X.
    Wang, Zh
    Zhang, Q.
    Ci, H.
    Wang, P.
    Yu, L.
    Jia, G.
    RUSSIAN JOURNAL OF PLANT PHYSIOLOGY, 2019, 66 (01) : 119 - 127
  • [9] Identification of Salt Stress Response Genes in Rosa chinensis Leaves by Comparative RNA-seq Analysis of Transcriptome Dynamics
    X. Tian
    Zh. Wang
    Q. Zhang
    H. Ci
    P. Wang
    L. Yu
    G. Jia
    Russian Journal of Plant Physiology, 2019, 66 : 119 - 127
  • [10] Transcriptome analysis of rice-seedling roots under soil-salt stress using RNA-Seq method
    Chandran, Anil Kumar Nalini
    Kim, Jeong-Won
    Yoo, Yo-Han
    Park, Hye Lin
    Kim, Yeon-Ju
    Cho, Man-Ho
    Jung, Ki-Hong
    PLANT BIOTECHNOLOGY REPORTS, 2019, 13 (06) : 567 - 578
123