Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis

[1] Whitman WB(1998)Prokaryotes: the unseen majority Proc Natl Acad Sci 95 6578-83

[2] Coleman DC(2011)Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-End illumina reads Appl Environ Microbiol 77 3846-52

[3] Wiebe WJ(2012)Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms Isme J 6 1621-4

[4] Bartram AK(2011)Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample Proc Natl Acad Sci U S A 108 4516-22

[5] Lynch MDJ(2012)Illumina-based analysis of microbial community diversity Isme J 6 183-94

[6] Stearns JC(2012)Elevated carbon dioxide alters the structure of soil microbial communities Appl Environ Microbiol 78 2991-95

[7] Moreno-Hagelsieb G(2011)BIPES, a cost-effective high-throughput method for assessing microbial diversity Isme J 5 741-9

[8] Neufeld JD(2011)Reproducibility and quantitation of amplicon sequencing-based detection Isme J 5 1303-13

[9] Caporaso JG(2013)The long-term stability of the human Gut microbiota Science 341 44-U53

[10] Lauber CL(2013)Robustness of amplicon deep sequencing underlines its utility in clinical applications J Mol Diagn 15 473-84

[1] Whitman WB(1998)Prokaryotes: the unseen majority Proc Natl Acad Sci 95 6578-83

[2] Coleman DC(2011)Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-End illumina reads Appl Environ Microbiol 77 3846-52

[3] Wiebe WJ(2012)Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms Isme J 6 1621-4

[4] Bartram AK(2011)Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample Proc Natl Acad Sci U S A 108 4516-22

[5] Lynch MDJ(2012)Illumina-based analysis of microbial community diversity Isme J 6 183-94

[6] Stearns JC(2012)Elevated carbon dioxide alters the structure of soil microbial communities Appl Environ Microbiol 78 2991-95

[7] Moreno-Hagelsieb G(2011)BIPES, a cost-effective high-throughput method for assessing microbial diversity Isme J 5 741-9

[8] Neufeld JD(2011)Reproducibility and quantitation of amplicon sequencing-based detection Isme J 5 1303-13

[9] Caporaso JG(2013)The long-term stability of the human Gut microbiota Science 341 44-U53

[10] Lauber CL(2013)Robustness of amplicon deep sequencing underlines its utility in clinical applications J Mol Diagn 15 473-84