Site-specific labeling of proteins with NMR-active unnatural amino acids

被引:0
作者
David H. Jones
Susan E. Cellitti
Xueshi Hao
Qiong Zhang
Michael Jahnz
Daniel Summerer
Peter G. Schultz
Tetsuo Uno
Bernhard H. Geierstanger
机构
[1] Genomics Institute of the Novartis Research Foundation,Department of Chemistry and the Skaggs Institute for Chemical Biology
[2] The Scripps Research Institute,undefined
来源
Journal of Biomolecular NMR | 2010年 / 46卷
关键词
Site-specific labeling; Unnatural amino acids; Spin label; Metal chelator; In-cell NMR;
D O I
暂无
中图分类号
学科分类号
摘要
A large number of amino acids other than the canonical amino acids can now be easily incorporated in vivo into proteins at genetically encoded positions. The technology requires an orthogonal tRNA/aminoacyl-tRNA synthetase pair specific for the unnatural amino acid that is added to the media while a TAG amber or frame shift codon specifies the incorporation site in the protein to be studied. These unnatural amino acids can be isotopically labeled and provide unique opportunities for site-specific labeling of proteins for NMR studies. In this perspective, we discuss these opportunities including new photocaged unnatural amino acids, outline usage of metal chelating and spin-labeled unnatural amino acids and expand the approach to in-cell NMR experiments.
引用
收藏
页码:89 / 100
页数:11
相关论文
共 352 条
  • [1] Allegrozzi M(2000)Lanthanide-induced pseudocontact shifts for solution structure refinements of macromolecules in shells up to 40 å from the metal ion J Am Chem Soc 122 4154-4161
  • [2] Bertini I(2004)The unusually stable quaternary structure of human Cu, Zn-superoxide dismutase 1 is controlled by both metal occupancy and disulfide status J Biol Chem 279 47998-48003
  • [3] Janik MBL(2003)Superoxide dismutase folding/unfolding pathway: tole of the metal ions in modulating structural and dynamical features J Mol Biol 330 145-158
  • [4] Lee Y-M(2006)Human SOD1 before harboring the catalytic metal: soltuion structure of copper-depleted, disulfide-reduced form J Biol Chem 281 2333-2337
  • [5] Liu G(2000)Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data Biochemistry 39 5355-5365
  • [6] Arnesano F(1961)Proton relaxation times in paramagnetic solutions effects of electron spin relaxation J Chem Phys 34 842-850
  • [7] Banci L(2000)Isotope-filtered NMR methods for the study of biomolecular structure and interactions Prog NMR Spectrosc 36 323-372
  • [8] Bertini I(2005)Polychromatic selective population inversion for TROSY experiments with large proteins J Am Chem Soc 127 405-411
  • [9] Martinelli M(2006)Mapping structural interactions using in-cell NMR spectroscopy (STINT-NMR) Nat Methods 3 91-93
  • [10] Furukawa Y(2006)In-cell NMR for protein-protein interactions (STINT-NMR) Nat Protoc 1 146-152