Virulence and molecular analysis of atypical pathotypes of yellow rust pathogen in India

被引:2
作者
Gangwar O.P. [1 ]
Kumar S. [1 ]
Kashyap P.L. [1 ]
Bhardwaj S.C. [1 ]
Prasad P. [1 ]
Savadi S. [1 ]
Khan H. [1 ]
Deepshikha [2 ]
机构
[1] Regional Station, ICAR-Indian Institute of Wheat and Barley Research, Flowerdale, Shimla, 171002, Himachal Pradesh
[2] G.B. Pant University of Agriculture and Technology, Pantnagar
关键词
Barley; Microsatellite; Puccinia; Rust; Wheat;
D O I
10.1007/s42360-019-00145-6
中图分类号
学科分类号
摘要
Wheat and barley yellow rust pathogens, Puccinia striiformis f. sp. tritici (Pst) and P. striiformis f. sp. hordei (Psh), respectively, can change quickly in virulence. The present study was conducted using host differentials and microsatellite marker assay to determine the relationship of two newly detected atypical Pst pathotypes (6S0 and 7S0) with known pathotypes from wheat (46S103, 47S103, 46S119, 111S68 and 79S68) and barley (0S0-1, 4S0, 0S0 and 1S0). A set of 21 SSR markers were used to determine inter-relationship among these pathotypes. In toto, 79 alleles were detected across the 21 loci. Six markers (RJ22, SUNIPst9-40, SUNIPst09-48, SUNIPst10-48, SUNIPst11-01 and SUNIPst16-10) were found highly informative. The polymorphism information content (PIC) values of these markers were > 0.69. These markers provided useful information on genetic divergence of newly emerged Pst pathotypes. Principle component analysis (PCoA) explained 62.91% variation among the analysed pathotypes. The molecular variation studies showed that new Pst pathotypes (6S0 and 7S0) are more close to known pathotypes from barley than from wheat. The major distinction in term of virulence was that pathotype 7S0 possessed extra virulence for Yr1 and lacked virulence for rpsTr1 and rpsTr2. © 2019, Indian Phytopathological Society.
引用
收藏
页码:187 / 194
页数:7
相关论文
共 42 条
[1]  
Ali S., Gladieux P., Leconte M., Gautier A., Justesen A.F., Hovmoller M.S., Et al., Origin, migration routes and worldwide population genetic structure of the wheat yellow rust pathogen Puccinia striiformis f. sp. tritici, PLoS Pathog, 10, (2014)
[2]  
Atienza S.G., Jafary H., Niks R.E., Accumulation of genes for susceptibility to rust fungi for which barley is nearly a non-host results in two barley lines with extreme multiple susceptibility, Planta, 220, pp. 71-79, (2004)
[3]  
Bahadur P., Physiologic specialization in wheat rusts, Problems and progress of wheat pathology in south Asia, pp. 69-91, (1986)
[4]  
Bahri B., Leconte M., de Vallavieille-Pope C., Jerome Enjalbert J., Isolation of ten microsatellite loci in an EST library of the phytopathogenic fungus Puccinia striiformis f.sp. tritici, Conserv Genet, 10, pp. 1425-1428, (2009)
[5]  
Bailey J., Karaoglu H.R., Wellings C., Park R.F., Isolation and characterization of 25 genome-derived simple sequence repeat markers for Puccinia striiformis f. sp. tritici, Mol Ecol Resour, 13, pp. 760-762, (2013)
[6]  
Bailey J., Karaoglu H., Wellings C.R., Et al., PCR-based simple sequence repeat markers for diagnostic identification of major clonal lineages of Puccinia striiformis f. sp. tritici and related stripe rust pathogens in Australia, Australas Plant Pathol, 44, 1, pp. 97-103, (2015)
[7]  
Bettgenhaeuser J., Gilbert B., Ayliffe M., Moscou M.J., Nonhost resistance to rust pathogens—a continuation of continua, Front Plant Sci, 5, (2014)
[8]  
Bhardwaj S.C., Gangwar O.P., Seedling resistance evaluation and concept of pathotyping for barley rusts, A compendium of lectures on “Malting Quality Improvement in Barley, Sorghum & Corn, (2012)
[9]  
Bhardwaj S.C., Gangwar O.P., Singh S.B., Saharan M.S., Sharma S., Rust situation and pathotypes of Puccinia species in Leh Ladakh in relation to recurrence of wheat rusts in India, Indian Phytopathol, 65, 3, pp. 230-232, (2012)
[10]  
Bhardwaj S.C., Prasad P., Gangwar O.P., Khan H., Kumar S., Wheat rust research—then and now, Indian J Agric Sci, 86, 10, pp. 1231-1244, (2016)