Brownian-dynamics simulations of protein–protein interactions in the photosynthetic electron transport chain

被引：3

作者：

Khruschev S.S. ^{[1
]}

Abaturova A.M. ^{[1
]}

Diakonova A.N. ^{[1
]}

Fedorov V.A. ^{[1
]}

Ustinin D.M. ^{[1
]}

Kovalenko I.B. ^{[1
]}

Riznichenko G.Y. ^{[1
]}

Rubin A.B. ^{[1
]}

机构：

[1] Department of Biology, Lomonosov Moscow State University, Moscow

来源：

Biophysics | 2015年 / 60卷 / 2期

基金：

俄罗斯基础研究基金会;

关键词：

Brownian dynamics; electron transport; multiparticle computer simulation; photosyn-; thesis; protein–protein interactions;

D O I：

10.1134/S0006350915020086

中图分类号：

学科分类号：

摘要：

The application of Brownian dynamics for simulation of transient protein–protein interactions is reviewed. The review focuses on the theoretical basics of the Brownian-dynamics method, its particular implementations, and the advantages and drawbacks of this method. The outlook for future development of Brownian dynamics-based simulation techniques is discussed. Special attention is given to analysis of Brownian dynamics trajectories. The second part of the review is dedicated to the role of Brownian-dynamics simulations in studying photosynthetic electron transport. Interactions of mobile electron carriers (plastocyanin, cytochrome c6, and ferredoxin) with their reaction partners (cytochrome b6f complex, photosystem I, ferredoxin:NADP reductase, and hydrogenase) are considered. © 2015, Pleiades Publishing, Inc.

引用

页码：212 / 231

页数：19

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