Regulation by the RNA-binding protein Unkempt at its effector interface

被引:2
|
作者
Shah, Kriti [1 ,2 ]
He, Shiyang [1 ,2 ]
Turner, David J. [3 ]
Corbo, Joshua [3 ,8 ]
Rebbani, Khadija [3 ]
Dominguez, Daniel [4 ]
Bateman, Joseph M. [5 ]
Cheloufi, Sihem [1 ,2 ,6 ]
Igreja, Catia [7 ]
Valkov, Eugene [3 ]
Murn, Jernej [1 ,2 ]
机构
[1] Univ Calif Riverside, Dept Biochem, 3401 Watkins Dr,Boyce Hall, Riverside, CA 92521 USA
[2] Ctr RNA Biol & Med, 900 Univ Ave, Riverside, CA 92521 USA
[3] NCI, RNA Biol Lab, Ctr Canc Res, Frederick, MD 21702 USA
[4] Univ N Carolina, Dept Pharmacol, Chapel Hill, NC 27599 USA
[5] Kings Coll London, Maurice Wohl Clin Neurosci Inst, 5 Cutcombe Rd, London SE5 9RX, England
[6] Univ Calif Riverside, Stem Cell Ctr, 900 Univ Ave, Riverside, CA 92521 USA
[7] Dept Integrat Evolutionary Biol, Max Planck Ring 9, D-72076 Tubingen, Germany
[8] Harvard Univ, Dept Mol & Cellular Biol, 52 Oxford St, Cambridge, MA 02138 USA
基金
美国国家卫生研究院;
关键词
MESSENGER-RNA; CCR4-NOT COMPLEX; TRANSLATIONAL REPRESSION; GENE; RECOGNITION; PABP; TRANSCRIPTOME; RECRUITMENT; EXPRESSION; PROTEOMICS;
D O I
10.1038/s41467-024-47449-4
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
How RNA-binding proteins (RBPs) convey regulatory instructions to the core effectors of RNA processing is unclear. Here, we document the existence and functions of a multivalent RBP-effector interface. We show that the effector interface of a conserved RBP with an essential role in metazoan development, Unkempt, is mediated by a novel type of 'dual-purpose' peptide motifs that can contact two different surfaces of interacting proteins. Unexpectedly, we find that the multivalent contacts do not merely serve effector recruitment but are required for the accuracy of RNA recognition by Unkempt. Systems analyses reveal that multivalent RBP-effector contacts can repurpose the principal activity of an effector for a different function, as we demonstrate for the reuse of the central eukaryotic mRNA decay factor CCR4-NOT in translational control. Our study establishes the molecular assembly and functional principles of an RBP-effector interface. How RNA-binding proteins (RBPs) regulate gene expression via effectors of RNA processing is unclear. Here, the authors dissect the effector interface of an essential RBP, Unkempt, and investigate its contribution to translational control in cells.
引用
收藏
页数:18
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