A transposable approach to RNA-seq from total RNA

被引:0
|
作者
Scott Kuersten
机构
[1] Epicentre (an Illumina company),
关键词
D O I
10.1038/nmeth.f.357x
中图分类号
学科分类号
摘要
The rapid progress of RNA-seq technology requires the development of simple, versatile tools that competently reflect RNA levels in the cell. We have developed the TotalScript™ RNA-Seq Kit, a new, transposome-based directional library prep method suitable for a variety of RNA sample types and a range of input. TotalScript libraries exhibit high complexity, ∼97–99% directionality and low rRNA contamination. The method is scalable and robust, allowing input amounts of ∼100 pg of poly(A)+ RNA or ∼5 ng of total RNA.
引用
收藏
页码:916 / 916
相关论文
共 50 条
  • [21] Effective ribosomal RNA depletion for single-am total RNA-seq by scDASH
    Loi, Danson S. C.
    Yu, Lei
    Wu, Angela R.
    PEERJ, 2021, 9
  • [22] Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM)
    Grant, Gregory R.
    Farkas, Michael H.
    Pizarro, Angel D.
    Lahens, Nicholas F.
    Schug, Jonathan
    Brunk, Brian P.
    Stoeckert, Christian J.
    Hogenesch, John B.
    Pierce, Eric A.
    BIOINFORMATICS, 2011, 27 (18) : 2518 - 2528
  • [23] Multivariate approach to the analysis of correlated RNA-seq data
    Park, Hyunjin
    Lee, Seungyeoun
    Kim, Ye Jin
    Choi, Myung-Sook
    Park, Taesung
    2016 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2016, : 1783 - 1786
  • [24] CRAC: an integrated approach to the analysis of RNA-seq reads
    Nicolas Philippe
    Mikaël Salson
    Thérèse Commes
    Eric Rivals
    Genome Biology, 14
  • [25] CRAC: an integrated approach to the analysis of RNA-seq reads
    Philippe, Nicolas
    Salson, Mikael
    Commes, Therese
    Rivals, Eric
    GENOME BIOLOGY, 2013, 14 (03):
  • [26] Identification of CNAs from RNA-Seq data
    Iwamoto, Eisuke
    Sanada, Masashi
    Yasuda, Takahiko
    CANCER SCIENCE, 2022, 113 : 1446 - 1446
  • [27] OMICfpp: a fuzzy approach for paired RNA-Seq counts
    Alberto Berral-Gonzalez
    Angela L. Riffo-Campos
    Guillermo Ayala
    BMC Genomics, 20
  • [28] OMICfpp: a fuzzy approach for paired RNA-Seq counts
    Berral-Gonzalez, Alberto
    Riffo-Campos, Angela L.
    Ayala, Guillermo
    BMC GENOMICS, 2019, 20 (1)
  • [29] A Modified RNA-Seq Approach for Whole Genome Sequencing of RNA Viruses from Faecal and Blood Samples
    Batty, Elizabeth M.
    Wong, T. H. Nicholas
    Trebes, Amy
    Argoud, Karene
    Attar, Moustafa
    Buck, David
    Ip, Camilla L. C.
    Golubchik, Tanya
    Cule, Madeleine
    Bowden, Rory
    Manganis, Charis
    Klenerman, Paul
    Barnes, Eleanor
    Walker, A. Sarah
    Wyllie, David H.
    Wilson, Daniel J.
    Dingle, Kate E.
    Peto, Tim E. A.
    Crook, Derrick W.
    Piazza, Paolo
    PLOS ONE, 2013, 8 (06):
  • [30] Deciphering RNA degradation: Insights from a comparative analysis of paired fresh frozen/FFPE total RNA-seq
    Choi, Wonyoung
    Yeon, Miyeon
    Choi, Hyo Young
    Hayes, David Neil
    CANCER RESEARCH, 2024, 84 (06)