A survey of analysis software for array-comparative genomic hybridisation studies to detect copy number variation

被引：0
|
作者：
Karimpour-Fard A. [1 ]
Dumas L. [2 ]
Phang T. [3 ]
Sikela J.M. [2 ]
Hunter L.E. [1 ]
机构：
[1] Center for Computational Pharmacology, University of Colorado, School of Medicine, Aurora
[2] Department of Pharmacology, Health Sciences Center, University of Colorado at Denver, Aurora
[3] Department of Medicine, University of Colorado Denver, School of Medicine, Denver
来源：
Human Genomics | / 4卷 / 6期
基金：
美国国家卫生研究院;
关键词：
aCGH; CNV; copy number variants; deletion; duplication; insertion;
D O I：
10.1186/1479-7364-4-6-421
中图分类号：
学科分类号：
摘要：
Copy number variants (CNVs) create a major source of variation among individuals and populations. Array-based comparative genomic hybridisation (aCGH) is a powerful method used to detect and compare the copy numbers of DNA sequences at high resolution along the genome. In recent years, several informatics tools for accurate and efficient CNV detection and assessment have been developed. In this paper, most of the well known algorithms, analysis software and the limitations of that software will be briefly reviewed.
引用
收藏
页码：421 / 427
页数：6
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