EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics

被引:0
作者
Ghanasyam Rallapalli
Eric M Kemen
Alexandre Robert-Seilaniantz
Cécile Segonzac
Graham J Etherington
Kee Hoon Sohn
Daniel MacLean
Jonathan D G Jones
机构
[1] Norwich Research Park,The Sainsbury Laboratory
[2] Max-Planck Institute for Plant Breeding Research,UMR INRA
[3] INRA,Agrocampus Ouest
[4] UMR1349,Université de Rennes 1
[5] IGEPP,Institute of Agriculture and Environment
[6] BP35327,undefined
[7] Massey University,undefined
来源
BMC Genomics | / 15卷
关键词
Next generation sequencing; Tag-seq; High throughput expression profiling; RNA-seq; EXPRSS;
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[31]  
Ito A(1992)Type III restriction enzymes need two inversely oriented recognition sites for DNA cleavage Nature 355 467-170
[32]  
Saitoh H(2004)5[prime]-end SAGE for the analysis of transcriptional start sites Nat Biotech 22 1146-663
[33]  
Kamoun S(2005)Comparison of standard exponential and linear techniques to amplify small cDNA samples for microarrays BMC Genomics 6 61-231
[34]  
Winter P(2010)Comprehensive comparative analysis of strand-specific RNA sequencing methods Nat Meth 7 709-1835
[35]  
Kahl G(2008)Gene expression profiling by massively parallel sequencing Genome Res 18 172-1484
[36]  
Reuter M(2008)A large genome center’s improvements to the Illumina sequencing system Nat Methods 5 1005-561
[37]  
Krüger DH(2009)Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing Proc Natl Acad Sci 106 3264-386
[38]  
Terauchi R(1982)High-efficiency cloning of full-length cDNA Mol Cell Biol 2 161-846
[39]  
Shendure J(1996)Analysis of differential gene expression by display of 3′ end restriction fragments of cDNAs Proc Natl Acad Sci 93 659-3233
[40]  
Ji H(2011)Large scale loss of data in Low-diversity illumina sequencing libraries Can Be recovered by deferred cluster calling PLoS ONE 6 e16607-58