Yamadazyma siamensis sp. nov., Yamadazyma phyllophila sp. nov. and Yamadazyma paraphyllophila sp. nov., three novel yeast species isolated from phylloplane in Thailand and Taiwan

被引:0
作者
Rungluk Kaewwichian
Wichien Yongmanitchai
Hiroko Kawasaki
Pi-Han Wang
Shan-Hua Yang
Savitree Limtong
机构
[1] Faculty of Science,Department of Microbiology
[2] Kasetsart University,Department of Biotechnology
[3] NITE Biological Resource Center (NBRC),Department of Life Sciences
[4] National Institute of Technology and Evaluation (NITE),undefined
[5] Tunghai University,undefined
来源
Antonie van Leeuwenhoek | 2013年 / 103卷
关键词
sp. nov.; sp. nov.; sp. nov.; Phylloplane yeast; Ascomycete yeast; New yeast species; Thailand; Taiwan;
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摘要
Four strains representing three novel anamorphic yeast species were isolated from the external surface of sugarcane leaves (DMKU-RK254T), corn leaves (DMKU-RK548T), bean leaves (K129) in Thailand and hengchun pencilwood leaves (TrB1-1T) in Taiwan. On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, the sequence analysis of the D1/D2 region of the large subunit (LSU) rRNA gene, the internal transcribed spacer (ITS) region, the actin gene (ACT1) and the elongation factor 2 gene (EF2), the four strains were determined to represent novel Yamadazyma species although formation of ascospores was not observed. Strain DMKU-RK254T was determined to be related to Candida diddensiae, Candida naeodendra and Candida kanchanaburiensis but with 1.8, 1.8 and 2.0 % nucleotide substitutions in the D1/D2 region of the LSU rRNA gene, respectively. It was assigned to Yamadazyma siamensis sp. nov. (type strain DMKU-RK254T = BCC 50730T = NBRC 108901T = CBS 12573T). The sequences of the D1/D2 region of the LSU rRNA gene, the ITS region, ACT1 gene and EF2 gene of two strains (DMKU-RK548T and K129) were identical but differed from that of strain TrB1-1T by 0.6, 1.0, 3.3 and 5.9 % nucleotide substitutions, respectively. Therefore, the two strains (DMKU-RK548T and K129) and strain TrB1-1T were assigned to be two separate species. The closest species in terms of pairwise sequences similarity of the D1/D2 region to the two novel species was Yamadazyma philogaea but with 1.1–1.7 % nucleotide substitutions. The two strains (DMKU-RK548T and K129) were assigned to Yamadazyma phyllophila sp. nov. (type strain DMKU-RK548T = BCC 50736T = NBRC 108906T = CBS 12572T) and the strain TrB1-1T was named Yamadazyma paraphyllophila sp. nov. (type strain TrB1-1T = BCRC 23030T = CCTCC AY 204005T = CBS 9928T).
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页码:777 / 788
页数:11
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