Flexible modeling for stock-recruitment relationships using Bayesian nonparametric mixtures

被引:0
作者
Kassandra Fronczyk
Athanasios Kottas
Stephan Munch
机构
[1] University of California,Department of Applied Mathematics and Statistics, Baskin School of Engineering
[2] Marine Science Research Center,undefined
[3] Stony Brook University,undefined
来源
Environmental and Ecological Statistics | 2012年 / 19卷
关键词
Dirichlet process; Log-reproductive success; Markov chain Monte Carlo; Multivariate normal mixtures; North Atlantic cod; Stock biomass;
D O I
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中图分类号
学科分类号
摘要
The stock and recruitment relationship is fundamental to the management of fishery natural resources. However, inferring stock-recruitment relationships is a challenging problem because of the limited available data, the collection of plausible models, and the biological characteristics that should be reflected in the model. Motivated by limitations of traditional parametric stock-recruitment models, we propose a Bayesian nonparametric approach based on a mixture model for the joint distribution of log-reproductive success and stock biomass. Flexible mixture modeling for this bivariate distribution yields rich inference for the stock-recruitment relationship through the implied conditional distribution of log-reproductive success given stock biomass. The method is illustrated with cod data from six regions of the North Atlantic, including comparison with simpler Bayesian parametric and semiparametric models.
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页码:183 / 204
页数:21
相关论文
共 56 条
  • [1] Barot S(2004)Long-term trend in the maturation reaction norm of two cod stocks Ecol Appl 14 1257-1271
  • [2] Heino M(2004)Effect of the North Atlantic Oscillation on recruitment of Atlantic cod (Gadus morhua) Can J Fish Aquat Sci 61 1558-1564
  • [3] O’Brien L(1999)A neural network model for forecasting fish stock recruitment Can J Fish Aquat Sci 56 2385-2396
  • [4] Dieckmann U(2005)Why environmental scientists are becoming Bayesians Ecol Lett 8 2-14
  • [5] Brander K(1998)A sustainability criterion for the exploitation of North Sea cod ICES J Mar Sci 55 1061-1070
  • [6] Mohn R(2007)Eastern Baltic cod (Gadus morhua callarias) stock dynamics: extending the analytical assessment back to the mid-1940s ICES J Mar Sci 64 1257-1271
  • [7] Chen DG(1995)Bayesian density estimation and inference using mixtures J Am Stat Assoc 90 577-588
  • [8] Ware DM(1988)Predicting recruitment from stock size without the mediation of a functional relation J Cons Cons Int Explor Mer 44 111-122
  • [9] Clark JS(1973)A Bayesian analysis of some nonparametric problems Ann Stat 1 209-230
  • [10] Cook RM(1998)Model choice: a minimum posterior predictive loss approach Biometrika 85 1-11