High-throughput analysis of spatio-temporal dynamics in Dictyostelium

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作者
Satoshi Sawai
Xiao-Juan Guan
Adam Kuspa
Edward C Cox
机构
[1] Princeton University,Department of Molecular Biology
[2] ERATO Complex Systems Biology Project,Departments of Biochemistry and Molecular and Human Genetics
[3] JST,undefined
[4] Baylor College of Medicine,undefined
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Additional Data File; Spiral Wave; Aberrant Behavior; Wavelet Power Spectrum; Parker Automation;
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摘要
We demonstrate a time-lapse video approach that allows rapid examination of the spatio-temporal dynamics of Dictyostelium cell populations. Quantitative information was gathered by sampling life histories of more than 2,000 mutant clones from a large mutagenesis collection. Approximately 4% of the clonal lines showed a mutant phenotype at one stage. Many of these could be ordered by clustering into functional groups. The dataset allows one to search and retrieve movies on a gene-by-gene and phenotype-by-phenotype basis.
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