Association of tomato leaf curl Sudan virus with leaf curl disease of tomato in Jeddah, Saudi Arabia

被引:4
作者
Sohrab S.S. [1 ]
Yasir M. [1 ]
El-Kafrawy S.A. [1 ]
Abbas A.T. [1 ]
Mousa M.A.A. [2 ,3 ]
Bakhashwain A.A. [2 ]
机构
[1] Special Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Post Box No. 80216, Jeddah
[2] Faculty of Metrology and Arid Land Agriculture, King Abdulaziz University, Jeddah
[3] Department of Horticulture, Assiut University, Assiut
关键词
Begomovirus; Betasatellite; Saudi Arabia; Tomato leaf curl disease; Tomato leaf curl Sudan virus;
D O I
10.1007/s13337-016-0308-x
中图分类号
学科分类号
摘要
Tomato is an important vegetable crop and its production is adversely affected by leaf curl disease caused by begomovirus. Leaf curl disease is a serious concern for tomato crops caused by begomovirus in Jeddah, Kingdom of Saudi Arabia. Tomato leaf curl disease has been shown to be mainly caused either by tomato leaf curl Sudan virus or tomato yellow leaf curl virus as well as tomato leaf curl Oman virus. Many tomato plants infected with monopartite begomoviruses were also found to harbor a symptom enhancing betasatellites. Here we report the association of tomato leaf curl Sudan virus causing leaf curl disease of tomato in Jeddah, Kingdom of Saudi Arabia. The complete genome sequence analysis showed highest (99.9 %) identity with tomato leaf curl Sudan virus causing leaf curl disease in Arabian Peninsula. In phylogenetic relationships analysis, the identified virus formed closest cluster with tomato leaf curl Sudan virus. In recombination analysis study, the major parent was identified as tomato leaf curl Sudan virus. Findings of this study strongly supports the associated virus is a variant of tomato leaf curl Sudan virus causing disease in Sudan, Yemen and Arabian Peninsula. The betasatellites sequence analysis showed highest identity (99.8 %) with tomato leaf curl betasatellites-Amaranthus-Jeddah. The phylogenetic analysis result based on betasatellites formed closed cluster with tomato yellow leaf curl Oman betasatellites. The importance of these findings and occurrence of begomovirus in new geographic regions causing leaf curl disease of tomato in Jeddah, Kingdom of Saudi Arabia are discussed. © 2016, Indian Virological Society.
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页码:145 / 153
页数:8
相关论文
共 30 条
[11]  
Hanssen I.M., Lapidot M., Thomma B.P.H.J., Emerging viral diseases of tomato crops, Mol Plant-Microbe Interact, 23, pp. 539-548, (2010)
[12]  
Hosseinzadeh M.R., Bakhsh M.S., Osaloo S.K., Brown J.K., Phylogenetic relationships, recombination analysis, and genetic variability among diverse variants of tomato yellow leaf curl virus in Iran and the Arabian Peninsula: further support for a TYLCV center of diversity, Arch Virol, 159, pp. 485-497, (2014)
[13]  
Idris A.M., Brown J.K., Evidence for interspecific-recombination for three monopartite begomoviral genomes associated with the tomato leaf curl disease from central Sudan, Arch Virol, 150, pp. 1003-1012, (2005)
[14]  
Idris A.M., Shahid M.S., Briddon R.W., Khan A.J., Zhu J.K., Brown J.K., An unusual alpha satellite associated with monopartite begomoviruses attenuates symptoms and reduces betasatellite accumulation, J Gen Virol, 92, pp. 706-717, (2011)
[15]  
Idris A.M., Abdullah N.M., Brown J.K., Leaf curl diseases of two Solanaceous species in Southwest Arabia are caused by a monopartite begomovirus evolutionarily most closely related to a species from the Nile Basin and unique suite of betasatellites, Virus Res, 169, pp. 296-300, (2012)
[16]  
Idris A.M., Al-Saleh Piatek M.J., Al-Shahwan I., Ali S., Brown J.K., Viral metagenomics: analysis of begomoviruses by illumina high-throughput sequencing, Viruses, 6, pp. 1219-1236, (2014)
[17]  
Kenyon L., Tsai W.S., Shih S.L., Lee L.M., Emergence and diversity of begomoviruses infecting Solanaceous crops in East and Southeast Asia, Virus Res, 186, pp. 104-113, (2014)
[18]  
Khan A.J., Idris A.M., Al-Saady N.A., Al-Mahruki M.S., Al-Subhi A.M., Brown J.K., A divergent isolate of tomato yellow leaf curl virus from Oman with an associated DNA beta satellite: an evolutionary link between Asian and the Middle Eastern virus-satellite complexes, Virus Genes, 36, pp. 169-176, (2008)
[19]  
Khan A.J., Akhtar S., Singh A.K., Briddon R.W., A distinct strain of tomato leaf curl Sudan virus causes tomato leaf curl disease in Oman, Plant Dis, 97, pp. 1396-1402, (2013)
[20]  
Khan A.J., Akhtar S., Al-Zaidia A.M., Singh A.K., Briddon R.W., Genetic diversity and distribution of a distinct strain of Chili leaf curl virus and associated betasatellite infecting tomato and pepper in Oman, Virus Res, 177, pp. 87-97, (2013)