The first chromosome-level genome of the stag beetle Dorcus hopei Saunders, 1854 (Coleoptera: Lucanidae)

被引:1
|
作者
Li, Xiaolu [1 ]
Mao, Chuyang [2 ,3 ]
He, Jinwu [2 ,3 ]
Bin, Xiaoyan [1 ]
Liu, Guichun [2 ,3 ]
Dong, Zhiwei [2 ,3 ]
Zhao, Ruoping [2 ,3 ]
Wan, Xia [1 ]
Li, Xueyan [2 ,3 ]
机构
[1] Anhui Univ, Sch Resources & Environm Engn, Dept Ecol, Hefei 230601, Peoples R China
[2] Chinese Acad Sci, Kunming Inst Zool, Key Lab Genet Evolut & Anim Models, Kunming 650223, Yunnan, Peoples R China
[3] Yunnan Key Lab Biodivers Informat, Kunming 650223, Yunnan, Peoples R China
基金
中国国家自然科学基金;
关键词
SEQUENCE; TOOL; PREDICTION; MANDIBLES; EVOLUTION; PROVIDES; REVEALS; SYSTEM; LENGTH; FINDER;
D O I
10.1038/s41597-024-03251-x
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Stag beetles (Coleoptera: Lucanidae) represent a significant saproxylic assemblage in forest ecosystems and are noted for their enlarged mandibles and male polymorphism. Despite their relevance as ideal models for the study of exaggerated mandibles that aid in attracting mates, the regulatory mechanisms associated with these traits remain understudied, and restricted by the lack of high-quality reference genomes for stag beetles. To address this limitation, we successfully assembled the first chromosome-level genome of a representative species Dorcus hopei. The genome was 496.58 Mb in length, with a scaffold N50 size of 54.61 Mb, BUSCO values of 99.8%, and 96.8% of scaffolds anchored to nine pairs of chromosomes. We identified 285.27 Mb (57.45%) of repeat sequences and annotated 11,231 protein-coding genes. This genome will be a valuable resource for further understanding the evolution and ecology of stag beetles, and provides a basis for studying the mechanisms of exaggerated mandibles through comparative analysis.
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页数:7
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