Identifying binary protein-protein interactions from affinity purification mass spectrometry data

被引：0
|
作者：
Xiao-Fei Zhang
Le Ou-Yang
Xiaohua Hu
Dao-Qing Dai
机构：
[1] Central China Normal University,School of Mathematics and Statistics
[2] Sun Yat-Sen University,Intelligent Data Center and Department of Mathematics
[3] Central China Normal University,School of Computer
[4] Drexel University,College of Information Science and Technology
来源：
BMC Genomics | / 16卷
关键词：
Protein-protein interactions; Direct physical interactions; Scoring methods; Affinity purification mass spectrometry data;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [41] crisscrosslinkeR: identification and visualization of protein-RNA and protein-protein interactions from crosslinking mass spectrometry
    Gail, Emma H.
    Shah, Anup D.
    Schittenhelm, Ralf B.
    Davidovich, Chen
    BIOINFORMATICS, 2020, 36 (22-23) : 5530 - 5532
  • [42] Affinity Purification Mass Spectrometry on the Orbitrap-Astral Mass Spectrometer Enables High-Throughput Protein-Protein Interaction Mapping
    Serrano, Lia R.
    Pelin, Adrian
    Arrey, Tabiwang N.
    Damoc, Nicolaie E.
    Richards, Alicia L.
    Zhou, Yuan
    Lancaster, Noah M.
    Peters-Clarke, Trenton M.
    Pashkova, Anna
    Jang, Gwendolyn M.
    Eckhardt, Manon
    Quarmby, Scott T.
    Zeller, Martin
    Hermanson, Daniel
    Stewart, Hamish
    Hock, Christian
    Makarov, Alexander
    Zabrouskov, Vlad
    Krogan, Nevan J.
    Coon, Joshua J.
    Swaney, Danielle L.
    JOURNAL OF PROTEOME RESEARCH, 2025, 24 (04) : 2006 - 2016
  • [43] Identifying network biomarkers based on protein-protein interactions and expression data
    Xin, Jingxue
    Ren, Xianwen
    Chen, Luonan
    Wang, Yong
    BMC MEDICAL GENOMICS, 2015, 8
  • [44] Identifying network biomarkers based on protein-protein interactions and expression data
    Jingxue Xin
    Xianwen Ren
    Luonan Chen
    Yong Wang
    BMC Medical Genomics, 8
  • [45] Use of protein-protein interactions in affinity chromatography
    Muronetz, VI
    Sholukh, M
    Korpela, T
    JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS, 2001, 49 (1-3): : 29 - 47
  • [46] Specificity and affinity quantification of protein-protein interactions
    Yan, Zhiqiang
    Guo, Liyong
    Hu, Liang
    Wang, Jin
    BIOINFORMATICS, 2013, 29 (09) : 1127 - 1133
  • [47] PPI-MASS: An Interactive Web Server to Identify Protein-Protein Interactions From Mass Spectrometry-Based Proteomics Data
    Gonzalez-Avendano, Mariela
    Zuniga-Almonacid, Simon
    Silva, Ian
    Lavanderos, Boris
    Robinson, Felipe
    Rosales-Rojas, Roberto
    Duran-Verdugo, Fabio
    Gonzalez, Wendy
    Caceres, Monica
    Cerda, Oscar
    Vergara-Jaque, Ariela
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
  • [48] Protein-DNA Arrays as Tools for Detection of Protein-Protein Interactions by Mass Spectrometry
    Gogolin, Lars
    Schroeder, Hendrik
    Itzen, Aymelt
    Goody, Roger S.
    Niemeyer, Christof M.
    Becker, Christian F. W.
    CHEMBIOCHEM, 2013, 14 (01) : 92 - 99
  • [49] Protein-ligand and protein-protein interactions studied by electrospray ionization and mass spectrometry
    Burkitt, WI
    Derrick, PJ
    Lafitte, D
    Bronstein, I
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2003, 31 : 985 - 989
  • [50] DNA-protein arrays as tools for detection of protein-protein interactions by mass spectrometry
    Becker, CFW
    Wacker, R
    Bouschen, W
    Seidel, R
    Kolaric, B
    Lang, P
    Schroeder, H
    Niemeyer, CM
    Spengler, B
    Goody, RS
    Engelhard, M
    BIOPOLYMERS, 2005, 80 (04) : 499 - 499
12345