Comparison of pre-processing methods for multiplex bead-based immunoassays

[1] Molloy MP(2003)Overcoming technical variation and biological variation in quantitative proteomics Proteomics 3 1912-9

[2] Brzezinski EE(2012)Pipeline to assess the greatest source of technical variance in quantitative proteomics using metabolic labelling J Proteomics 77 441-54

[3] Hang J(2002)Microarray data normalization and transformation Nat Genet 32 496-501

[4] McDowell MT(2010)Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3 BMC Genomics 11 349-72

[5] VanBogelen RA(2012)Analyzing Illumina gene expression microarray data from different tissues: methodological aspects of data analysis in the MetaXpress Consortium PLoS ONE 7 e50938-50

[6] Russell MR(2010)Quality control for genome-wide association studies Methods Mol Biol 628 341-7

[7] Lilley KS(2009)Genome-wide association studies: quality control and population-based measures Genet Epidemiol 33 S45-72

[8] Quackenbush J(2005)Normalization for affymetrix GeneChips Methods Inf Med 44 414-8

[9] Schmid R(2004)Comparing transformation methods for DNA microarray data BMC Bioinformatics 5 77-14

[10] Baum P(2012)An evaluation of two-channel ChIP-on-chip and DNA methylation microarray normalization strategies BMC Genomics 13 42-52

[1] Molloy MP(2003)Overcoming technical variation and biological variation in quantitative proteomics Proteomics 3 1912-9

[2] Brzezinski EE(2012)Pipeline to assess the greatest source of technical variance in quantitative proteomics using metabolic labelling J Proteomics 77 441-54

[3] Hang J(2002)Microarray data normalization and transformation Nat Genet 32 496-501

[4] McDowell MT(2010)Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3 BMC Genomics 11 349-72

[5] VanBogelen RA(2012)Analyzing Illumina gene expression microarray data from different tissues: methodological aspects of data analysis in the MetaXpress Consortium PLoS ONE 7 e50938-50

[6] Russell MR(2010)Quality control for genome-wide association studies Methods Mol Biol 628 341-7

[7] Lilley KS(2009)Genome-wide association studies: quality control and population-based measures Genet Epidemiol 33 S45-72

[8] Quackenbush J(2005)Normalization for affymetrix GeneChips Methods Inf Med 44 414-8

[9] Schmid R(2004)Comparing transformation methods for DNA microarray data BMC Bioinformatics 5 77-14

[10] Baum P(2012)An evaluation of two-channel ChIP-on-chip and DNA methylation microarray normalization strategies BMC Genomics 13 42-52