A “Low-Molecular” Approach to the Identification of Microorganisms by MALDI Mass Spectrometry

被引:0
|
作者
B. L. Milman
Yu. Yu. Ilyasov
N. V. Lugovkina
A. A. Golovina
A. V. Dmitriev
机构
[1] Institute of Experimental Medicine,
[2] Institute of Toxicology,undefined
来源
Journal of Analytical Chemistry | 2017年 / 72卷
关键词
mass spectrometry; MALDI; identification; bacteria; mass spectral libraries;
D O I
暂无
中图分类号
学科分类号
摘要
A new approach to the identification of microorganisms is presented. It includes the transformation of their MALDI mass spectra aimed at reducing mass scale by one order of magnitude and the use of standard software for building mass spectral libraries of low-molecular compounds and library searches. A library of 728 transformed (“rescaled”) mass spectra of 182 strains for some Streptococcus species was built. With this library, the rate of true microorganism identification was estimated by cross-comparison between library mass spectra (internal validation of the approach). The true identification rate was 84% for three Streptococcus species, which corresponds to the average trueness of species identification by MALDI as found in the literature. The proposed approach to identification can be considered as a method of choice for solving identification problems under consideration.
引用
收藏
页码:1280 / 1288
页数:8
相关论文
共 50 条
  • [1] A "Low-Molecular" Approach to the Identification of Microorganisms by MALDI Mass Spectrometry
    Milman, B. L.
    Ilyasov, Yu. Yu.
    Lugovkina, N. V.
    Golovina, A. A.
    Dmitriev, A. V.
    JOURNAL OF ANALYTICAL CHEMISTRY, 2017, 72 (13) : 1280 - 1288
  • [2] A Comparison of "Low-Molecular" and Conventional Approaches to the Species Identification of Bacteria by MALDI Mass Spectrometry
    Milman, B. L.
    Gostev, V. V.
    Dmitriev, A. V.
    JOURNAL OF ANALYTICAL CHEMISTRY, 2018, 73 (13) : 1217 - 1222
  • [3] A Comparison of “Low-Molecular” and Conventional Approaches to the Species Identification of Bacteria by MALDI Mass Spectrometry
    B. L. Milman
    V. V. Gostev
    A. V. Dmitriev
    Journal of Analytical Chemistry, 2018, 73 : 1217 - 1222
  • [4] Identification of fungal microorganisms by MALDI-TOF mass spectrometry
    Chalupova, Jana
    Raus, Martin
    Sedlarova, Michaela
    Sebela, Marek
    BIOTECHNOLOGY ADVANCES, 2014, 32 (01) : 230 - 241
  • [5] Use of the MALDI BioTyper system with MALDI–TOF mass spectrometry for rapid identification of microorganisms
    Kazuyuki Sogawa
    Masaharu Watanabe
    Kenichi Sato
    Syunsuke Segawa
    Chisato Ishii
    Akiko Miyabe
    Syota Murata
    Tomoko Saito
    Fumio Nomura
    Analytical and Bioanalytical Chemistry, 2011, 400
  • [6] Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
    Angolini, Celio F. F.
    Pilau, Eduardo J.
    Lopes-Oliveira, Patricia F.
    Garcia, Isabel N. S.
    Gozzo, Fabio C.
    de Oliveira, Valeria M.
    Marsaioli, Anita J.
    JOURNAL OF THE BRAZILIAN CHEMICAL SOCIETY, 2015, 26 (03) : 513 - 520
  • [7] An ultra superfast identification of low-molecular components of pharmaceuticals by DART mass spectrometry
    Chernetsova, E. S.
    Bochkov, P. O.
    Ovcharov, M. V.
    Zatonskii, G. V.
    Abramovich, R. A.
    JOURNAL OF ANALYTICAL CHEMISTRY, 2010, 65 (14) : 1537 - 1539
  • [8] An ultra superfast identification of low-molecular components of pharmaceuticals by DART mass spectrometry
    E. S. Chernetsova
    P. O. Bochkov
    M. V. Ovcharov
    G. V. Zatonskii
    R. A. Abramovich
    Journal of Analytical Chemistry, 2010, 65 : 1537 - 1539
  • [9] Use of the MALDI BioTyper system with MALDI-TOF mass spectrometry for rapid identification of microorganisms
    Sogawa, Kazuyuki
    Watanabe, Masaharu
    Sato, Kenichi
    Segawa, Syunsuke
    Ishii, Chisato
    Miyabe, Akiko
    Murata, Syota
    Saito, Tomoko
    Nomura, Fumio
    ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2011, 400 (07) : 1905 - 1911
  • [10] MALDI-TOF mass spectrometry in the accelerated identification of microorganisms of the Vibrio genus
    Afanasev, M. V.
    Mironova, L. V.
    Basov, E. A.
    Ostyak, A. S.
    Kulikalova, E. S.
    Urbanovich, L. Ya
    Balahonov, S. V.
    MOLECULAR GENETICS MICROBIOLOGY AND VIROLOGY, 2014, 29 (03) : 115 - 122