Complete mitochondrial genome of Gracilaria changii (Rhodophyta: Gracilariaceae)

被引:0
作者
Sze-Looi Song
Hoi-Sen Yong
Phaik-Eem Lim
Siew-Moi Phang
机构
[1] University of Malaya,Institute of Ocean and Earth Sciences
[2] University of Malaya,Institute of Biological Sciences
来源
Journal of Applied Phycology | 2017年 / 29卷
关键词
Mitochondrial genome; Rhodophyta;
D O I
暂无
中图分类号
学科分类号
摘要
Gracilaria changii is an agarophyte that has been used for agar extraction and as salads. Currently, there are only three complete mitochondrial genomes of Gracilaria species available in GenBank. We report here the complete mitogenome of G. changii from Peninsular Malaysia using next-generation sequencing. It had a total length of 25,729 bp, comprising 50 genes (25 protein-coding genes – PCGs, 2 rRNA genes, and 23 tRNA genes). The gene synteny of G. changii was similar to G. salicornia from Peninsular Malaysia with three additional tRNA genes (trnY, trnR, trnS1) in comparison to G. salicornia from Hawaii. G. changii had similar start codons (ATG) for all the PCGs, but three (rps3, rpl20, and secY) had incomplete T-stop codons. Genomic data of G. changii is useful to build a more complete dataset for phylogenetic analyses in Gracilariaceae.
引用
收藏
页码:2129 / 2134
页数:5
相关论文
共 50 条
[41]   EVALUATION OF STEAM EXPLOSION AS PRETREATMENT IN AGAR EXTRACTION FROM GRACILARIA-DURA (C-AGARDH) J-AGARDH (GRACILARIACEAE, RHODOPHYTA) [J].
MURANO, E ;
TOFFANIN, R ;
KNUTSEN, SH ;
FOCHER, B ;
RIZZO, R ;
PAOLETTI, S .
JOURNAL OF APPLIED PHYCOLOGY, 1993, 5 (04) :417-424
[42]   Characterization of the Complete Mitochondrial Genome of the Red Alga Ahnfeltiopsis flabelliformis (Rhodophyta, Gigartinales, Phyllophoraceae) and Its Phylogenetic Analysis [J].
Patil, Maheshkumar Prakash ;
Kim, Jong-Oh ;
Kim, Young-Ryun ;
Nirmal, Nilesh ;
Kim, Gun-Do ;
Kim, Kyunghoi .
BIOLOGY-BASEL, 2025, 14 (06)
[43]   Complete chloroplast genome sequences of Pyropia dentata (Bangiales, Rhodophyta) [J].
Choi, Sung-Je ;
Kim, Yonguk ;
Shin, Jawon ;
Kim, Dong-Wook ;
Lee, Hak-Sung ;
Choi, Chulyung .
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02) :1785-1786
[44]   The complete mitochondrial genome of the Cyathochromis obliquidens [J].
Wen, Xiangru ;
Wang, Cailin ;
Li, Man ;
Wang, Haiyan ;
Qi, Dashi .
MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (01) :354-355
[45]   The complete mitochondrial genome of Cichla ocellaris [J].
Lin, Minghui ;
Mu, Xidong ;
Yan, Xi .
MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02) :620-622
[46]   The complete mitochondrial genome of Leiocassis longirostris [J].
Pan, Tingshuang ;
Jiang, He ;
Ling, Jun ;
Duan, Guoqing ;
Cui, Kai .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :1323-1324
[47]   The complete mitochondrial genome of Pseudoxenodon macrops [J].
Zong, Hao ;
Zhao, Tianmeng ;
Hu, Tao ;
Feng, Dan ;
Li, Jialing ;
Du, Rong ;
Fu, Changkun .
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02) :1473-1474
[48]   Complete mitochondrial genome of the Trachypithecus francoisi [J].
Jiang, Qin-Yang ;
Yan, Xue-Yu ;
Wei, Ling-Jing ;
Huang, Yan-Na .
MITOCHONDRIAL DNA PART A, 2016, 27 (02) :828-829
[49]   Complete mitochondrial genome of the Loligo japonica [J].
Jiang, Lihua ;
Kang, Lisen ;
Wu, Changwen .
MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02) :493-494
[50]   Complete mitochondrial genome of Coregonus muksum [J].
Xu, Ge-Feng ;
Mou Zhen-Bo ;
Hao Qi-Rui ;
Ying Han .
MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) :9-10