Unsupervised gene selection using biological knowledge : application in sample clustering

[1] de Souto MC(2008)Clustering cancer gene expression data: a comparative study BMC Bioinformatics 9 497-16

[2] Costa IG(2010)On biclustering of gene expression data Curr Bioinforma 5 204-87

[3] de Araujo DS(2001)Biomarker identification by feature wrappers Genome Res 11 1878-71

[4] Ludermir TB(1997)Selection of relevant features and examples in machine learning Artif Intell 97 245-8

[5] Schliep A(2003)Unsupervised feature selection applied to content-based retrieval of lung images IEEE Trans Pattern Anal Mach Intell 25 373-8

[6] Mukhopadhyay A(2006)A literature-based similarity metric for biological processes BMC Bioinformatics 7 363-35

[7] Maulik U(2008)Defining functional distances over gene ontology BMC Bioinformatics 9 50-7

[8] Bandyopadhyay S(2007)Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks Bioinformatics 23 282-7

[9] Xiong M(2007)Gosim–an r-package for computation of information theoretic go similarities between terms and gene products BMC Bioinformatics 8 166-9

[10] Fang X(2006)Cluster analysis of protein array results via similarity of gene ontology annotation BMC Bioinformatics 7 338-32

[1] de Souto MC(2008)Clustering cancer gene expression data: a comparative study BMC Bioinformatics 9 497-16

[2] Costa IG(2010)On biclustering of gene expression data Curr Bioinforma 5 204-87

[3] de Araujo DS(2001)Biomarker identification by feature wrappers Genome Res 11 1878-71

[4] Ludermir TB(1997)Selection of relevant features and examples in machine learning Artif Intell 97 245-8

[5] Schliep A(2003)Unsupervised feature selection applied to content-based retrieval of lung images IEEE Trans Pattern Anal Mach Intell 25 373-8

[6] Mukhopadhyay A(2006)A literature-based similarity metric for biological processes BMC Bioinformatics 7 363-35

[7] Maulik U(2008)Defining functional distances over gene ontology BMC Bioinformatics 9 50-7

[8] Bandyopadhyay S(2007)Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks Bioinformatics 23 282-7

[9] Xiong M(2007)Gosim–an r-package for computation of information theoretic go similarities between terms and gene products BMC Bioinformatics 8 166-9

[10] Fang X(2006)Cluster analysis of protein array results via similarity of gene ontology annotation BMC Bioinformatics 7 338-32